| Id Trinity | TRINITY_DN48687_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_367778 |
| Sequence | AATAATCTTAGAATCAATTGAGTTCTACGCTAAAAAAACAATCTATTAGAATCAATTCCAATAAATCTTATTTTCTTGTGAACGTAATATATATATATAT AGTAGCTTTAGCATTCCCTAGAAGACAACAGAAAATATGGCAAGGTGGATGCTTGTGATGTTGTTACTGGTTTGCATTGTAGAAGCAAAACTTCATGATA TCAAAACTTTCAACGTGAATGACTATGGTGCAATTGCAGATGACAACACTGATAATTCTAGAGTATTTTTGAAAGCATGGAGTGATGCATGCAACTGGCA TGGAAGAGCAATGTTTAGAATACCAAGAGGAACCTACAAGATCAACCCAATCGTATTTACTGGTCCATGCAAGGGTTCGAAAATCTTTCAATTACAAGGG GTTTTGAAGGCTCCTATAAATAGTCCAACTTCAGAATCCACTTGGATAAATTTCAGGTATATTAATAACCTCATCTTGAATGGAGGTGGTATTTTAGATG GTCAAGGAGCTTCAGTTTGGGGACACAATGGTCACCATGTCCTTATAGTAAGTTCTTAATTTCTATAATATATTTTTTCTTAGAAACCACACATCATTCT TTTTAACACATTATATACAATAGTGATTAATGTATAAATAAGTAAGCATGAACCTCTATTACTTAGTAGAATAATTGTGGATGTTAATCAATTAAAAATA GTATTATCATATGTTTCTTATTATATCATGAAACAGAAAGAGACAAGATCAAATTTCAATAGGCTCTAAGAATGTTACAGCATTTTATAACATAATAGTA ACATTATATAAATAATAGTCTTCCATATCGTGCATTACTTGACACCCTTAATTGGTACTTAGATTCTTGATTTTATATTATCTCACATGAAAAATAAAAC TCTCAATTGATCTTTGATCTTGTACTGGATAGTCACATCTTATATTTATTTAATACAAATTTGCTTATCGAAAAAAATATATTTTATAAATAAAATTACC ATGTTGGTCTAGATTATTATTACTTTTGTTATTAGCTTTACATGTAATAATATGTTGTAACTTGTATTATGATAAACTTGAACAGACAATGGGATTTGCC TTCATCAGCAACAGTTATGTCCATCAATTAAGTTCTATTAACAGCCAAAATGCACACATAGCAGTATTTTCTTGTAAGAACATGACCCTTAGAAATATAA CATTAACAGCCCCTAGAGATAGCCCAAACACTGATGGTATCAAACTATCTAAGTCACAAGGAATAAATATAAAAAATGTACACATTGGCACCGGTGATGA TTGTATAGCTATAATCTCTGGTACCAAGAATGTGAATATTTCAAATGTCTATTGTGGTCCTGGTCATGGAATTAGTGTTGGAAGCCTTGGGAAGCATGAT GATGAAGTTGATGTGCGAGACATACATGTGAAGAATTGCACCTTTAATGGTACTAGTGATGGTCTTAGAATCAAAACTTGGGCATCTCCTTTGAACCACA CTTTAAAGGCTTCTAATTTTGTGTATGAAGACATTGTCATTATTGATGTGGAACATCCCATTAACATTGATCAAGAATATTGTCCAAGTGGTAATTGTGG AAATAAGGTACCTTCAAAAGTGCAAATCAGCAATGTGCATTACAAAAATATTCGAGGGAGTTGCAAGGGTGATATTGCAGTCAATTTTAAGTGCAGTAAA TCAAACCCATGCCAAAACATAACAGGGATCGACGTTAATTTGTGGAGTAGTTTAGGTCGCACAGGAACACTGACAAATTATTGTTCCCATGTCCACGGTG CTTTTTACGGCAAACAGCTTCCTCCATCATGCATTTAGTGCAGTTCTTTTATACGAGACTCTACATTAAAGTTATAATAGAAGTTGTAATAATTATGAGT CATATATGAATCACACAATAAAGTATTTTCTCATATTCCGCTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_163253; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_367778
| Blastp | Exopolygalacturonase from Platanus with 44.86% of identity |
|---|---|
| Blastx | Exopolygalacturonase from Platanus with 44.86% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434660.1) |
| Pfam | Glycosyl hydrolases family 28 (PF00295.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |