Ll_transcript_367779

• Id Trinity: TRINITY_DN48687_c1_g1_i4
• Name Transcript: Ll_transcript_367779
• Sequence: AATAATCTTAGAATCAATTGAGTTCTACGCTAAAAAAACAATCTATTAGAATCAATTCCAATAAATCTTATTTTCTTGTGAACGTAATATATATATATAT AGTAGCTTTAGCATTCCCTAGAAGACAACAGAAAATATGGCAAGGTGGATGCTTGTGATGTTGTTACTGGTTTGCATTGTAGAAGCAAAACTTCATGATA TCAAAACTTTCAACGTGAATGACTATGGTGCAATTGCAGATGACAACACTGATAATTCTAGAGTATTTTTGAAAGCATGGAGTGATGCATGCAACTGGCA TGGAAGAGCAATGTTTAGAATACCAAGAGGAACCTACAAGATCAACCCAATCGTATTTACTGGTCCATGCAAGGGTTCGAAAATCTTTCAATTACAAGGG GTTTTGAAGGCTCCTATAAATAGTCCAACTTCAGAATCCACTTGGATAAATTTCAGGTATATTAATAACCTCATCTTGAATGGAGGTGGTATTTTAGATG GTCAAGGAGCTTCAGTTTGGGGACACAATGGTCACCATGTCCTTATAACAATGGGATTTGCCTTCATCAGCAACAGTTATGTCCATCAATTAAGTTCTAT TAACAGCCAAAATGCACACATAGCAGTATTTTCTTGTAAGAACATGACCCTTAGAAATATAACATTAACAGCCCCTAGAGATAGCCCAAACACTGATGGT ATCAAACTATCTAAGTCACAAGGAATAAATATAAAAAATGTACACATTGGCACCGGTGATGATTGTATAGCTATAATCTCTGGTACCAAGAATGTGAATA TTTCAAATGTCTATTGTGGTCCTGGTCATGGAATTAGTGTTGGAAGCCTTGGGAAGCATGATGATGAAGTTGATGTGCGAGACATACATGTGAAGAATTG CACCTTTAATGGTACTAGTGATGGTCTTAGAATCAAAACTTGGGCATCTCCTTTGAACCACACTTTAAAGGCTTCTAATTTTGTGTATGAAGACATTGTC ATTATTGATGTGGAACATCCCATTAACATTGATCAAGAATATTGTCCAAGTGGTAATTGTGGAAATAAGGTACCTTCAAAAGTGCAAATCAGCAATGTGC ATTACAAAAATATTCGAGGGAGTTGCAAGGGTGATATTGCAGTCAATTTTAAGTGCAGTAAATCAAACCCATGCCAAAACATAACAGGGATCGACGTTAA TTTGTGGAGCAGTTTAGGTCGCACAGGAAGACTGACAAATTACTGTTCCAATGTTCACGGTGCTTTTTATGGCAAACAGTTTCCTCCATCATGCATCTAG TGTGCAGCTCTTTTATACGAGACTCCGATATGAAAATTCTAATAGAAGTTGTAATCAGTATAGTTAGGGTTTCCAAAATTGTACTGTATTATGAATAACA ATCAATTATACTAAAATAGTTCATAATTTAATTCACAACACTATAGACAACAACGAAAGTCGTATGGAATAAAACAAATTTAAATCATAAGGGTCAATCA TATCATAATCTATAACTCGT
• Tissue: pods
• Gene name: LI_gene_163253;
• Additional information: details;

Expression of Ll_transcript_367779

FPKM

• PAB: 101.8
• PNAB: 283
• PS1: 498.5
• PS2: 24.9
• PS3: 81.8
• PW1: 5.7
• PW2: 1.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_367779

• Blastp: Exopolygalacturonase from Platanus with 43.48% of identity
• Blastx: Exopolygalacturonase from Platanus with 43.48% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434660.1)
• Pfam: Pectate lyase superfamily protein (PF12708.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;