Ll_transcript_370232

• Id Trinity: TRINITY_DN48689_c0_g3_i6
• Name Transcript: Ll_transcript_370232
• Sequence: TAATATGAATACTTAGTAAGATAATATATTATTTTGCGGAAGAAAATATTCTTCATTAACTTCTTCATAATAATGATGGTACAAGCATAACACAACACTT AGATGCAGCAAGTGATGCTGTTCTAATATAAGCCACTCGTGCTTCAACCCATCGATCACAGCCGTCCATTTTCATCTCCAAGTGAAAGTGCAGGTCTTTC CCTCTCTCTCTCTCTCACACATTCATATTAGATCGAACCACTTGCACCTAAGCCACACCTTCAAGGACAACCTCTCACGCGCCACTCACGCGCCACTCAC GCGCCACTCCTCAGGCAATACCAACTTTAACAAGCTCCAAGGTCCGGAGCCACCAGCTGGGTCCATGATGAATGAAGCTATGAACTTGGATGATTGGATT ATTGAGGAGCCTCTTCATAGATTTAGTGAAGGTTTGAGGCTTAGGGCACGACAACGATGGAGATGGCGGCATCATCTTCCTATCCCTCCTCCTCCTGCAG TTCATGTTCATATTCCGGAAGTGCCACAGCATTTGCATTTTCATATACCGCCAGAAGCTCGGAATATCTCTATGGAATTGGACCAGTTGTTGGTCAACTC TGGTAATGGAAGTCTCTTACAGGCTGGTGAAGGCAGTGTGGCTGCTGAGGAGAGAATGGAGGTGGAGAAGCCCAAAGCATGTGAAAACAACAATGGTATT ATGGAGGACGAGACAGCAGCAAAGAAGGAAGATGTTGAAAAGGGTAGTGGCAATGACGGGGATTTTTTCGATTGTAACATATGTATGGACCTGGCCAAAG ATCCTGTTGTGACTTGCTGTGGTCATTTGTTTTGTTGGCCATGCCTATATCGATGGCTGCATTTACATTCCGATGCTAAGGAATGTCCAGTTTGCAAGGG AGAAGTGATTCTTAAGAATGTTACACCGATATATGGTCGTGGAAACAATGTTCGCGTTCCTGAGGAGGATGTCACTCTTAAAATCCCTCTCAGGCCTCAT GCTAGGCGTATTGAGAGTCTGAGACAAACCCTTCAGAGAAATCCATTTGCATATCCTTTTGACGAGATGATTCGACATCTTGGAAGCAGAGTTGATCGTA CTCGAGATTTAGTTCAGTCAAACAATCCAGACAATGCTCGTGAAATGGCTGAGAGAACCAGCTCGTTACTAAGTAGGTTTTTGACATCTAGAGGCATCCG AAGAGAGCAGAATGTTGGGGCACCCCCTGATGATGCGGTGGGTTTGACACAGAATAATCCTCCTGAGGCAGCAGGGGATAGCCGAAGGACCCATTCTCGC TCACTTCGAAGAACACAATCATATAGAGCAAGATTCGCATCAGCACTGAGTAGTTCTGCTGAAGGAATAGTGGATGCATACTTCAGCATCCAACCATTTG GTAGAAACCAAGAACAACCTCCTCCAGTTGATGACAGAGATTCATTTTCAAGCATTGGTGCTGTCATAAATTCAGAGAGTCAAGTGGACAGCGCCGTAGA AATTGATTCCATGGTATCCTTGTCAACTTCTTCTTCTAGGAGGAGAAATGATGCTTCGAGAGTGTCTGATGTAGACAGTGGAGATTCTCGTGCTCCAAGG CGAAGACGTTTGAACTGATAAAAAAAAGTGCTCTAGATCAAGTTATTACTATTCTGTCAAGTAACACATGATAATAATTTCCCAACATCTATGTAAGTGC TTCTTGCTGTGGCATACTGGCATCAACTTTTACAAGTTTTGTAGATTTAAGATGTTTTGGAAGTTAGAGCTCTGTTACTTACGGTATAAGAATGTTCTTT AAGGGCATGTATGCAATTTGGTTTTTAGAGAGAAAAAAGGTTGCAAGTGTATTTCATGACTCATGTCTTTCTCTTCCCAATATTGCCATCCAAAAACCAA TTAGCAAATAGACCTTAAGGATTGAGCAACTTAGAGTTTTGTCATTTAGAAACTATGTTTTGCTAAGAATAACTGATACTTTAGTTTGAAGTCTCAAACA ATTTCTCAGCTCATGCAGGTCAAGTTGCAGAATCTGACCCATTAATACTCCACAATGGTGGGAGCTTTTGTTCATCTTTAGTGTACTTGAGCACTCAATC TTTTTATAGTTCTTATTGCTACATTATCATTCAAGAGGTGATTAAATGATTTAGTAACATTCATTTTATTGGGTATATTCGTGTTAAGTCCATATTGGAT ATGAATGGATAAGTTTAAGAGTTTATAACACATTAAAAGGTCTATAGAATTATTGCCTTTAAGTTTTGGTTCAAGACTGGTGTATCACTTGTATTTGTCC AGTCTTCTCATGCATCCAGTTCACACCCAATTAATGGTATCAGAACTGATGGTTTGGCTTTTTGGCTGATAATTTTTTATAAGAATGTATCCAAC
• Tissue: pods
• Gene name: LI_gene_163262;
• Additional information: details;

Expression of Ll_transcript_370232

FPKM

• PAB: 0.7
• PNAB: 0.5
• PS1: 1.2
• PS2: 1.1
• PS3: 1.6
• PW1: 0.7
• PW2: 0.2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_370232

• Blastp: E3 ubiquitin-protein ligase RMA3 from Arabidopsis with 43.01% of identity
• Blastx: E3 ubiquitin-protein ligase RMA3 from Arabidopsis with 43.48% of identity
• Eggnog: Ring finger protein(ENOG4111IHV)
• Kegg: Link to kegg annotations (AT4G27470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421249.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;