Ll_transcript_369002

• Id Trinity: TRINITY_DN48691_c0_g1_i1
• Name Transcript: Ll_transcript_369002
• Sequence: CTTACCTTCTACACGTGCTTCCTTTTCACTAATTATTCGTTGCACTTATTTCCTTCACTCTCTCTACGAATTAAGAACTAAAAATGGAGCCGCTGCTGAG AGGCGAAAACAGTGGCCGGAGAGACCGGCCGCGGGGGTTACACCGCCGCTCCGATGCTCTCACTTACGGCTCCAATTACGAGAAAGCCGCCGCTCTCGTG GATCTGGCTGAAGATGGTGTTGGTCTCCCTGAGCAAATTCTTGATTCATCAAGCTTCCAAACTTATGCAAAATTTTATTTCATATTCACTAAATTCGACC TCATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAAAACAATACCACACATTCTTGCAAGGATAGAGA GTATTTCTTTTTGGGAGAGTTGCCATACCTTACTGCTGTTGAATGTATTATTTATGAGGGAATAATTCTTTTTCTGATAACCATACACACTTTCTTCCCA ATATCATATGAAGGATCCCATATATATTGGAAAAACACTACTAGTCAATTGAAGGTCTTTTGTCTATTAGTTCTTGTTGCTGATATGCTGGTTTATATGC TGTATTCATCTCCATTGGCTTTTAATTTTCTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTTGTTCTGAACGTTAGGGGGTTACGGGAAAC CGTCATTATCTTGGCTGGAATGCTTGCCACATACTTAAATGTCTTGGCTTTGGGGCTTCTGTTTCTTCTTTTTGCAAGTTGGGTGGCTTATGTGATGTTT GAAGATACAATACAAGGGAAAACAGTATTCACCTCCTATGGTACTACACTGTATCAGATATTTATTTTATTTACCACGTCCAATAACCCAGATGTTTGGG TTCCTGCCTACAAGGCTTCACGGTGGTATTGCTTATATTTCATTCTCTTTGTGCTGTTGGGGGTTTACTTTGTTACAAACTTGGTTCTTGCCGTTGTTTA TGACAGTTTCAAGAGTGAGCTTGTCAAACAAGTTTCTGAGACGGATCGTATGAGAAGAACCATGTTGGAGAAATCTTTTGATTTCTTAGATACAAATAAT GTTAGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAGGAGCTAAACAAGTACAGGACTTTGCCAAATATCTCCAGGGAAGAATTCGAGTTGATAT TTGATGAGCTGGATGATACTCATGATGTGAAGATCAATAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAATTCCAGAAGGAGGAATGCCT ATCTTACTTCGAGTATTTAGCATTCTACCATTCTCCTACCTCAAAGAAATTGAAAGCCTTCGTGAAGAGTCCCATGTTTGGATACCTAGTGTCCTTCATT CTCTTGCTGAATCTGGGCGCTGTTATTGTTGAGACAACGCTTGATATACAAAATAGTTCTGCTCAAAAGGTGTGGCAAGTGGTCGAGTTCATTTTTGGGT GGATATACGTAATAGAAATGGCTCTAAAGGTTTATTCATTTGGATTTGAGAACTACTGGAGAGATGGTCAAAACCGCTTTGATTTTATTATCACGTTGAT AATTGTCATTGGAGAAACTATAACTTTTGCTTCGTCTGATGGACAGACTTTTTTTTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTG AGGTTGATAAGGCTTCTAATGCATGTCAAGCAATACCGAGGCTTTGTTGCAACTTTCTTAACTCTTATACCAAGTTTGATGCCATACCTTGGGATCATAT TTTGTGTCATGTGTATTTATTGTTCACTCGGTGTACAGACATTTGGCGGAATGGTTAATGCTGGAAACCCCAAATTGGAAGCAACAGATCTTGCTGATAA TGACTATTTGCTTTTTAATTTCAATGATTATCCAAATGGAATGGTGACACTTTTCAATTTGCTAGTCATGGGGAACTGGCAAGCATGGATGCAGAGCTAC AAGGAATTAAGTGGGACTTCTTGGAGTTATGCATACTTCATTAGCTTCTACTTGATAACTGTTTTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGG AGGCATTCTTTGCTGAAATTGATATTGAGTCATCAGAAACTTGTGATGAACAAGACAAGGAAGTTGAAGGAGATAAATTGCGGAGACGGTCTGTCGGCAC AAAAACACGAAGCCAGAGGGTTGATGCACTTCTTCATCATATGTTGAGTGCTGAGTTATGTCAAACTGAGTCTTCCAATCCACCAAACTGAGATAAAATC ATTTTCAAGGTTGTAGACCGGTGCCAATGCAGTATCTTATACCATGGCAAATCTTATTTTCTATTGTTAACAATGCACACAAGAGTCCACCTTATCGTGT GAAATTTGTGCACATTTTCATGTGCTTTATGATTCATGCTATTATGCTGTTTCAGCACATGATAAATGCTTTGATTTGCTTGTGCTAAATGGGATTACAT GATCATAGATATGTCTTATTTATTCTGTGTGTTGTAATTACAACCTTTTTCTTTATTCTTTTAATCATGTCCAACTTTTTCTTGGTACTATTAATGGTAT TCTCTCATCAACTTTGATTTGTACTGCCGATAGAACTAATAAAATATCATAAGGTGGGAGTTTAGAATAATATATTTTCGAGTATCAAAAG
• Tissue: pods
• Gene name: LI_gene_163278;
• Additional information: details;

Expression of Ll_transcript_369002

FPKM

• PAB: 6.3
• PNAB: 24.3
• PS1: 14.3
• PS2: 6
• PS3: 11
• PW1: 16.9
• PW2: 17.2
• PW3: 9.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_369002

• Blastp: Two pore calcium channel protein 1 from Arabidopsis with 67.8% of identity
• Blastx: Two pore calcium channel protein 1A from Nicotiana with 67.57% of identity
• Eggnog: Two pore segment channel 1(ENOG410XZT8)
• Kegg: Link to kegg annotations (AT4G03560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437005.1)
• Pfam: Ion transport protein (PF00520.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;