Ll_transcript_369011

• Id Trinity: TRINITY_DN48691_c0_g1_i10
• Name Transcript: Ll_transcript_369011
• Sequence: CTTACCTTCTACACGTGCTTCCTTTTCACTAATTATTCGTTGCACTTATTTCCTTCACTCTCTCTACGAATTAAGAACTAAAAATGGAGCCGCTGCTGAG AGGCGAAAACAGTGGCCGGAGAGACCGGCCGCGGGGGTTACACCGCCGCTCCGATGCTCTCACTTACGGCTCCAATTACGAGAAAGCCGCCGCTCTCGTG GATCTGGCTGAAGATGGTGTTGGTCTCCCTGAGCAAATTCTTGATTCATCAAGCTTCCAAACTTATGCAAAATTTTATTTCATATTCACTAAATTCGACC TCATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAAAACAATACCACACATTCTTGCAAGGATAGAGA GTATTTCTTTTTGGGAGAGTTGCCATACCTTACTGCTGTTGAATGTATTATTTATGAGGGAATAATTCTTTTTCTGATAACCATACACACTTTCTTCCCA ATATCATATGAAGGATCCCATATATATTGGAAAAACACTACTAGTCAATTGAAGGTCTTTTGTCTATTAGTTCTTGTTGCTGATATGCTGGTTTATATGC TGTATTCATCTCCATTGGCTTTTAATTTTCTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTTGTTCTGAACGTTAGGGGGTTACGGGAAAC CGTCATTATCTTGGCTGGAATGCTTGCCACATACTTAAATGTCTTGGCTTTGGGGCTTCTGTTTCTTCTTTTTGCAAGTTGGGTGGCTTATGTGATGTTT GAAGATACAATACAAGGGAAAACAGTATTCACCTCCTATGGTACTACACTGTATCAGATATTTATTTTATTTACCACGTCCAATAACCCAGATGTTTGGG TTCCTGCCTACAAGTAAGAATTTGAATTTTATATTTGACTCTTCCTGGCTAGATGACTTTGTCCTTTCATTTGGAAATATTACCGGCCATCAATGCTCAC CATTTTTGTTGGATTTTTTAGGGCTTCACGGTGGTATTGCTTATATTTCATTCTCTTTGTGCTGTTGGGGGTTTACTTTGTTACAAACTTGGTTCTTGCC GTTGTTTATGACAGTTTCAAGAGTGAGCTTGTCAAACAAGTTTCTGAGACGGATCGTATGAGAAGAACCATGTTGGAGAAATCTTTTGATTTCTTAGATA CAAATAATGTTAGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAGGAGCTAAACAAGTACAGGACTTTGCCAAATATCTCCAGGGAAGAATTCGA GTTGATATTTGATGAGCTGGATGATACTCATGATGTGAAGATCAATAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAATTCCAGAAGGAG GAATGCCTATCTTACTTCGAGTATTTAGCATTCTACCATTCTCCTACCTCAAAGAAATTGAAAGCCTTCGTGAAGAGTCCCATGTTTGGATACCTAGTGT CCTTCATTCTCTTGCTGAATCTGGGCGCTGTTATTGTTGAGACAACGCTTGATATACAAAATAGTTCTGCTCAAAAGGTGTGGCAAGTGGTCGAGTTCAT TTTTGGGTGGATATACGTAATAGAAATGGCTCTAAAGGTTTATTCATTTGGATTTGAGAACTACTGGAGAGATGGTCAAAACCGCTTTGATTTTATTATC ACGTTGATAATTGTCATTGGAGAAACTATAACTTTTGCTTCGTCTGATGGACAGACTTTTTTTTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAA GAATGTTGAGGTTGATAAGGCTTCTAATGCATGTCAAGCAATACCGAGGCTTTGTTGCAACTTTCTTAACTCTTATACCAAGTTTGATGCCATACCTTGG GATCATATTTTGTGTCATGTGTATTTATTGTTCACTCGGTGTACAGACATTTGGCGGAATGGTTAATGCTGGAAACCCCAAATTGGAAGCAACAGATCTT GCTGATAATGACTATTTGCTTTTTAATTTCAATGATTATCCAAATGGAATGGTGACACTTTTCAATTTGCTAGTCATGGGGAACTGGCAAGCATGGATGC AGAGCTACAAGGAATTAAGTGGGACTTCTTGGAGTTATGCATACTTCATTAGCTTCTACTTGATAACTGTTTTGCTGCTTTTGAATTTGGTTGTTGCTTT TGTCTTGGAGGCATTCTTTGCTGAAATTGATATTGAGTCATCAGAAACTTGTGATGAACAAGACAAGGAAGTTGAAGGAGATAAATTGCGGAGACGGTCT GTCGGCACAAAAACACGAAGCCAGAGGGTTGATGCACTTCTTCATCATATGTTGAGTGCTGAGTTATGTCAAACTGAGTCTTCCAATCCACCAAACTGAG ATAAAATCATTTTCAAGGTTGTAGACCGGTGCCAATGCAGTATCTTATACCATGGCAAATCTTATTTTCTATTGTTAACAATGCACACAAGAGTCCACCT TATCGTGTGAAATTTGTGCACATTTTCATGTGCTTTATGATTCATGCTATTATGCTGTTTCAGCACATGATAAATGCTTTGATTTGCTTGTGCTAAATGG GATTACATGATCATAGATATGTCTTATTTATTCTGTGTGTTGTAATTACAACCTTTTTCTTTATTCTTTTAATCATGTCCAACTTTTTCTTGGTACTATT AATGGTATTCTCTCATCAACTTTGATTTGTACTGCCGATAGAACTAATAAAATATCATAAGGTGGGAGTTTAGAATAATATATTTTCGAGTATCAAAAG
• Tissue: pods
• Gene name: LI_gene_163278;
• Additional information: details;

Expression of Ll_transcript_369011

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.5
• PS2: 1.6
• PS3: 0.1
• PW1: 0
• PW2: 0.8
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_369011

• Blastp: Two pore calcium channel protein 1A from Nicotiana with 69.46% of identity
• Blastx: Two pore calcium channel protein 1A from Nicotiana with 64.42% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (107770546)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437005.1)
• Pfam: Ion transport protein (PF00520.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;