| Id Trinity | TRINITY_DN48692_c1_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_368753 |
| Sequence | CCTAAACCCATACTTCCCATAATTTTCAATTTGAGACCATCACCATCATCATCATCATCTTCTTCTTCTTCTCTCTTCCGCTTTCACCATGTCTACCCTT CAACCTCACATCAATTCTATCCGTTCCTACGAGTTACGCCTCATCCGTTCTACTCTCTCCCCTCCACCGTCCGATCCTCTCCCTCAATCTCAACCCTCCG ATCACCATCTCCACAACCTAATCAACGCTATCCTCGCTTCAATCGAATCAGGCTCTTACCTTCAAGCCCTTACTTCTGAGTCTTCTTCTCTCGTCTTCCA ACTCGGTCATGACTCGCCCCTCCCTCAACTCGACAACTCACTGGACTCTGCTGACCGAGTCTACTCCGAGTTGCTCGACCGCGCCGAGCTTTTCATACGA TACGATTCGACGGATAGTGAGGCTGATAAGGCTTCCAGGGTGGTGCTCGTGCTGTGCATTGCCGTTGCCGCGTTTCTAGGGTTTACACAATGTAACTTCA CAGGGCCTTTGGAGGGATTACCAAGATGCCCTCTGCCATTGGAAGCAGGTGAATTTACAGAATGGGACAATTGGGCGCGCAATCAGCTTATGTCTGCTGG CTCCGACTTGCTTGGGAAGTTCTCAAATCTTCAGTATATAGTTTTTGCTAAGATGTTGCTTATGCGGATGAAAGATTTATTATTTCAAGGAACGACATCT TCTACAATTGAGATTAGAAGCCTTTCATGGTGGCTTGCAAGGATTTTGCTTCTTCAACAGAGAATTTTGGATGGGCGGTCTTCTTCTTTGTGTGATATGT TGCATGTCTATATCGGCCAAGCTTTACAGCACTTTAGCTCTTCAGAAGAAGTTAAAAGTTATTGGGTTTCTAATTTACGTGATGGAGAGAGCTTAGCTAT TGTCTCCATGTTGCATTTAGAGGCTGGTATTATGGAATATGCCTATGGACGAGTCGACTCTTGCAAGAAACATTTTGAGTCTGCTGAGATGGCATCTGGG CTTCAGCTTTCAGTGACTGGGGCACTTGGTTTCCGTACTGTGCATCAGGTAGAACCAAAGGCTCAAAGGGTACTTGTTACAAACACAAGCCCATCAAACA ATTTCAATGGAAATGACATCCAAAAGTGTGATTCCAGTACTCATGAAGCTAACTTGCATCAGCGTGAAAGCAGTGAAGTATCTGACATACTTATAATACC AAAGTTGTTAGAAAATGATGACAACTCTAAAACTAGGCCACAAGGCAGCGAAAATGGTGTTCATATTACTACTAGTTTGACAGCAACACAACAGGCTGTA ATTCTTGCACATTGCCTTCTAATTGAGAAGAGCTCCCGACAAGATGAATTGCAAAGATGGGATATGGCTCCTTATATTGAGGCAATTGATTCACAGCGTT TGTCTTACTTCATTATACGATGTTTCTGCGATATCTTGCGTATTCGATGGGAGTCGTCCCGTAGTCGAACAAAGGAGCGTGCTTTACTGCTGATGGAAAA CATGGTGCAACGCATTTATGAGTCTTCTCCAGCAGTAGCAGAAAGAACTCCTCTCAGTTGTGGTGTTTATATGCCCAGTGTTCCTGCATTGAGAAAGGAA TATGGTGAACTCTTGGTGCGCTGTGGTTTGATAGGGGAGGCATTGAAAGTGTTTGAAGATTTGGAATTATGGGATAATCTCATACACTGCTATTGCCTAT TGGAGAAGAAAGCAACAGCTGTTGAACTCATCAGGAAACGTCTTTCAGAAAGACCCAATGATCCCAGGTTATGGTGCTCCCTGGGTGACACTACAACTAA TGACGCATGCTATGAAAAAGCTTTGGAGGTTTCAAACAATCGGTCTGCTAGAGCTAAGCGTTCTCTGGCTCGCAGTGCATACAATAGGGGAGACTATGAG ACATCTAAAATTTTGTGGGAGTCCGCAATGTCCATGAACTCTATGTATCCAGATGGTTGGTTTGCATTTGGGGCCGCTGCACTGAAGGCACGGGATATTG AAAAGGCTCTGGATGCTTTTACTCGTGCTGTTCAACTTGATCCTGACAATGGGGAAGCTTGGAATAACATCGCTTGCTTGCACTCGATCAAGAAAAAGAG CAAGGAGGCCTTCATTGCATTTAAGGAAGCCTTGAAGTTCAAACGAAACAGCTGGCAACTCTGGGAGAACTACAGCCATGTTGCTGTTGAAGTTGGCAAT ATTAGTCAGGCATTAGAAGGTGCACAGATGGTTTTGGACCTGTCCAAGAATAAAAGAGTAGATGTTGAATTATTTGAAAAAATCACAAGGGAGGTGGAAA GCAGGCTTCCAACAACTAATTCTTTGGATCCTTTAACAACTGATAATGAGTGTAATACAGATCAATGTTGCATTGCTGATGCTGGATCAGAACATGCAAA GCAAGGATCTGGAGTATCTGTTTCTGGAAGATCACGTGAAACAGAGCAATTAATATCATTACTTGGAAAAGTTTTACAGCAGATAGTTAAACATGGGAAT GGATGTGGACCTGAAATATGGGGCTTATATGCCAAATGGCACAGAATTAATGATGACCTTGTGATGTGTTCTGAAGCTCTCTTAAAGCAAGTTAGATCAC TCCAGGGATCTGACACATGGAAAGACCAAGATCGCTTCCAGAAGTTGGCAAAAGCATCCTTGGAACTTTGCAAGGTATACATGGAAATTTCCTCTTCTAG TGGTAGTAAGAAAGAACTGTTTACTGCTGAGATGCACCTGAAGAACATCATCAAACAGGCAAGATACTTGTTCTGATTTCTCCATTAAATATACTAAATT GTAAAGTTTTTCTGATTTGCTACTTGTAATCTCAGGCTCAGAGCTTCTCTAATACAGAAGAGTTCAGGGATATTCAGGCTTGCCATGACGAAGTGAAAAT CAAGCTCCAACC BLAST |
| Tissue | pods |
| Gene name | LI_gene_163288; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_368753
| Blastp | Tetratricopeptide repeat protein 27 from Homo with 26.26% of identity |
|---|---|
| Blastx | Tetratricopeptide repeat protein 27 homolog from Dictyostelium with 27.09% of identity |
| Eggnog | Tetratricopeptide repeat domain 27(ENOG410XNXB) |
| Kegg | Link to kegg annotations (55622) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433908.1) |
| Pfam | Tetratricopeptide repeat (PF07719.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |