Ll_transcript_368754

• Id Trinity: TRINITY_DN48692_c1_g3_i5
• Name Transcript: Ll_transcript_368754
• Sequence: CCTAAACCCATACTTCCCATAATTTTCAATTTGAGACCATCACCATCATCATCATCATCTTCTTCTTCTTCTCTCTTCCGCTTTCACCATGTCTACCCTT CAACCTCACATCAATTCTATCCGTTCCTACGAGTTACGCCTCATCCGTTCTACTCTCTCCCCTCCACCGTCCGATCCTCTCCCTCAATCTCAACCCTCCG ATCACCATCTCCACAACCTAATCAACGCTATCCTCGCTTCAATCGAATCAGGCTCTTACCTTCAAGCCCTTACTTCTGAGTCTTCTTCTCTCGTCTTCCA ACTCGGTCATGACTCGCCCCTCCCTCAACTCGACAACTCACTGGACTCTGCTGACCGAGTCTACTCCGAGTTGCTCGACCGCGCCGAGCTTTTCATACGA TACGATTCGACGGATAGTGAGGCTGATAAGGCTTCCAGGGTGGTGCTCGTGCTGTGCATTGCCGTTGCCGCGTTTCTAGGGTTTACACAATGTAACTTCA CAGGGCCTTTGGAGGGATTACCAAGATGCCCTCTGCCATTGGAAGCAGGTGAATTTACAGAATGGGACAATTGGGCGCGCAATCAGCTTATGTCTGCTGG CTCCGACTTGCTTGGGAAGTTCTCAAATCTTCAGTATATAGTTTTTGCTAAGATGTTGCTTATGCGGATGAAAGATTTATTATTTCAAGGAACGACATCT TCTACAATTGAGATTAGAAGCCTTTCATGGTGGCTTGCAAGGATTTTGCTTCTTCAACAGAGAATTTTGGATGGGCGGTCTTCTTCTTTGTGTGATATGT TGCATGTCTATATCGGCCAAGCTTTACAGCACTTTAGCTCTTCAGAAGAAGTTAAAAGTTATTGGGTTTCTAATTTACGTGATGGAGAGAGCTTAGCTAT TGTCTCCATGTTGCATTTAGAGGCTGGTATTATGGAATATGCCTATGGACGAGTCGACTCTTGCAAGAAACATTTTGAGTCTGCTGAGATGGCATCTGGG CTTCAGCTTTCAGTGACTGGGGCACTTGGTTTCCGTACTGTGCATCAGGTAGAACCAAAGGCTCAAAGGGTACTTGTTACAAACACAAGCCCATCAAACA ATTTCAATGGAAATGACATCCAAAAGTGTGATTCCAGTACTCATGAAGCTAACTTGCATCAGCGTGAAAGCAGTGAAGTATCTGACATACTTATAATACC AAAGTTGTTAGAAAATGATGACAACTCTAAAACTAGGCCACAAGGCAGCGAAAATGGTGTTCATATTACTACTAGTTTGACAGCAACACAACAGGCTGTA ATTCTTGCACATTGCCTTCTAATTGAGAAGAGCTCCCGACAAGATGAATTGCAAAGATGGGATATGGCTCCTTATATTGAGGCAATTGATTCACAGCGTT TGTCTTACTTCATTATACGATGTTTCTGCGATATCTTGCGTATTCGATGGGAGTCGTCCCGTAGTCGAACAAAGGAGCGTGCTTTACTGCTGATGGAAAA CATGGTGCAACGCATTTATGAGTCTTCTCCAGCAGTAGCAGAAAGAACTCCTCTCAGTTGTGGTGTTTATATGCCCAGTGTTCCTGCATTGAGAAAGGAA TATGGTGAACTCTTGGTGCGCTGTGGTTTGATAGGGGAGGCATTGAAAGTGTTTGAAGATTTGGAATTATGGGATAATCTCATACACTGCTATTGCCTAT TGGAGAAGAAAGCAACAGCTGTTGAACTCATCAGGAAACGTCTTTCAGAAAGACCCAATGATCCCAGGTTATGGTGCTCCCTGGGTGACACTACAACTAA TGACGCATGCTATGAAAAAGCTTTGGAGGTTTCAAACAATCGGTCTGCTAGAGCTAAGCGTTCTCTGGCTCGCAGTGCATACAATAGGGGAGACTATGAG ACATCTAAAATTTTGTGGGAGTCCGCAATGTCCATGAACTCTATGTATCCAGATGGTTGGTTTGCATTTGGGGCCGCTGCACTGAAGGCACGGGATATTG AAAAGGCTCTGGATGCTTTTACTCGTGCTGTTCAACTTGATCCTGACAATGGGGAAGCTTGGAATAACATCGCTTGCTTGCACTCGATCAAGAAAAAGAG CAAGGAGGCCTTCATTGCATTTAAGGAAGCCTTGAAGTTCAAACGAAACAGCTGGCAACTCTGGGAGAACTACAGCCATGTTGCTGTTGAAGTTGGCAAT ATTAGTCAGGCATTAGAAGGTGCACAGATGGTTTTGGACCTGTCCAAGAATAAAAGAGTAGATGTTGAATTATTTGAAAAAATCACAAGGGAGGTGGAAA GCAGGCTTCCAACAACTAATTCTTTGGATCCTTTAACAACTGATAATGAGTGTAATACAGATCAATGTTGCATTGCTGATGCTGGATCAGAACATGCAAA GCAAGGATCTGGAGTATCTGTTTCTGGAAGATCACGTGAAACAGAGCAATTAATATCATTACTTGGAAAAGTTTTACAGCAGATAGTTAAACATGGGAAT GGATGTGGACCTGAAATATGGGGCTTATATGCCAAATGGCACAGAATTAATGATGACCTTGTGATGTGTTCTGAAGCTCTCTTAAAGCAAGTTAGATCAC TCCAGGGATCTGACACATGGAAAGACCAAGATCGCTTCCAGAAGTTGGCAAAAGCATCCTTGGAACTTTGCAAGGTATACATGGAAATTTCCTCTTCTAG TGGTAGTAAGAAAGAACTGTTTACTGCTGAGATGCACCTGAAGAACATCATCAAACAGGCTCAGAGCTTCTCTAATACAGAAGAGTTCAGGGATATTCAG GCTTGCCATGACGAAGTGAAAATCAAGCTCCAACCGAATTAAATGGCTTGCTAAAATTTTGTTGAAGGCATTATTCAATTTGTAATGTAAGTTCTAACTT ACAAGTTTTGACATGGTGTCATTAGATTGAAGTTCAACCCAATGAAACCACAGAGGCATACATCAACAGAGGATGTCAAAAGCTTGCTCTCAGAATACAT GGCTGAAAGTAATAAGAATGTGCTTTGTATCATACAGTTTATGTTGTAGCATATTATTTAACATTCTTTAAGGAAATCGCAGATTGTTATGTTGAAGGGA AAAAAGAGAAAAAGACTACTCAATTTATTATTGATACACTGATACCTTAAATATTTATTGTTTATTTTTGGATGGTAAGGGAAGTAATATTAAGACTTGA GTCATGAACAGGACTCATCTGAAGTATTTGTTTCCCTTTCTTCTCTCTCAAAATTTAACTTACAAAAAAGATTGTAAGACTTTTAAAGTGAT
• Tissue: pods
• Gene name: LI_gene_163288;
• Additional information: details;

Expression of Ll_transcript_368754

FPKM

• PAB: 0
• PNAB: 4.8
• PS1: 3.7
• PS2: 2.9
• PS3: 3.4
• PW1: 1.7
• PW2: 2.2
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_368754

• Blastp: Tetratricopeptide repeat protein 27 homolog from Dictyostelium with 25.52% of identity
• Blastx: Tetratricopeptide repeat protein 27 homolog from Dictyostelium with 26.92% of identity
• Eggnog: Tetratricopeptide repeat domain 27(ENOG410XNXB)
• Kegg: Link to kegg annotations (DDB_G0293372)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433908.1)
• Pfam: Tetratricopeptide repeat (PF07719.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;