Ll_transcript_420410

• Id Trinity: TRINITY_DN48700_c0_g1_i5
• Name Transcript: Ll_transcript_420410
• Sequence: CACACTCACACAAAACTAAAACGATACCTTAGAGAAACAATAACAATGACAAAATAATCCTAAATGCCAGTCCTCATCTTAATTGTTCCGACACGAGAAT ATAATATATATTATTTATAAACTAATTATTAATAAATAAAGTATGATATGTGAAGTATTATTTTTTTATTGGTAAGAGAATTTAGTAATATCATTTTCAA CAAAAAGAAAAAAGAAGCTCAAGTTTGTTGTTAAAATGAAAACCACATCTACAATGCTTACAGCCCTACCAACTACAGAGTAGTGGTAGCAACAACAACA ACATCCACGACCCGATTACGTGACCCGATTACCACTATGTTCTTTTCACGGCATCTCACCGACACAACCTCCGCCGCCGCATCCGCCACCTCTTTCCGGT TCCCTTCTTCCGCCTCATCCGACGTTGACATTGCTCCTCCTGGTGTTCCTTCTAGAATCCCTTCCTCTACCTCTCACTTATTCTCTCAACCTTCTTCATG GTTCTCTTCTCCCTCTCTTGACCTCAAACGCTCTTCTTCTCAAGCACTCTACCATCCAACCATTTTGGGTATCCAAAACACAATTGGGCAAAATGAAGCT TGGTATTCTACAAGCCCTCTAGCCAAACGCCCTAGATACGAAAGTGGAAGCAATTTGCCTATATATCCACAGAGGCCAGGAGAGAAGGATTGTGCCCACT ATATGCTCACAAGAACCTGTAAGTTTGGAGAGAGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGAGGGTGGAATCCCAGATTGGAAAGAGGTGACTTT TTATTGTTATTATTTATGCCTATTAATATAATATCTTATTTTATAGTACATTTACTATTGGTTAATGCAACGTCGCATGTATCCGCACTATTTTATATTT ACACAAAATTATAGAATTGAGCATATATGTATATATGAAGTGCTATATTATATATATTAGTTTCACCTTGACTATTTCATTTTATTACACTTGACATAAA ATTTTTGATATCTACATATGTCAGTGTCCAACAGTGTATGGAGAAGTATTTATAAAGTATGAGAGAAAAAAGGTGGTGCATATATGTCCTGTACGATAGT ATAATTGTAGCATTCTACAAAAAAGTACAGTTGTTGTATATCCTCTTCTTTCTTAATGAAGTTCTTTTTCTATACAATAATAATAATAGCAGTACAGCTA TATAAAAATTTAAAACTAATAATAATCATAATAATACTAATGAAGACTAATAACTAGACCGAACATCTCAACAATCTGCCTGAAGTTGGAGCATGTAAAT CATATGCACATAGCCTTATAATCATAACTAGTTTGAGTACTTATGAGAAACTCGTTAAGGCATATATTACTTGGTTGCTTGATCTAACGAAAGTAATAGA GAAATTTCCTGATAAGATGTTATGGGGGGTAAAATGGAAATTCACCTCTATATGATTAGTCCTCTCATTAAAAATTGAGTTGGATGCATTATGTAAGGCA GCTTGGTTGTCAAATTTGAGTTGCATCTATTGTACTTCCTCGAACTTCAATTCTTGAAGCAAATATTATAGCCATGTACATATATTGGTTGAACATGGCT TAGTAATCTGCTTTTGTGCTTGACCTGTCAAAAAAAGTCTATATATGCCTAGAGATTGAAGATATCTTTTTTGTTTCCCTGATTTCTTGTTGTTCTTTTT TGTATCTGTTGTTCAAGGAGGTCAAATGTTTTTTTCTTGCTATTTTTTCATATTTTCCCTCGTTCATTGCTTCTAATGAAGTTTCTTATGTCAGAAAAGA GTGTTGTCACATGATTGTTGACAACTTTTTCACTTATTTGGAGTTGGGCTAGTTAATATATACCTATCTTTGAAATGGTCATTGTAGTCAACTGCTTAAC TATGTTACGATGATTTTATTACTAAGTTGTGAATCTACTTTTGTTCTAGTGCCCAAAACCCCTGAAGTTTAAGGTCGGTCTGAGAGATTATCTAAACTTT AAAACATGGGCAGTTTACGTTTTTGCTAGGATTCTATGTTATAGTTGTTTCATGTACTGACCTAAATATGGCATCTGAATTTGTATTTCTTACTGTTCTT ATATTTTGTAATTTGTCTCTATTGCCAATGTTTTTTTGTCATAAAGGTGAAATATATAGTGCTACAAAAACGGGTGAAATATAATCATCTAGCAATTTTA ATTCATAAATATGAAATGGTTTTACTAACTTGTTACAACAAACATGGTCAACTCTTACCTGATTTAGGTTCCAGATGTTGTTACAAACGAAACTCTTCCT GAGAGACCAGAGGAACCAGATTGTCCATACTTTGTGAAAACTCAGAGATGCAAGTTTGGTCCAAGGTGCAAGTTTAATCATCCAACGGTTTCCTCTGAAA GTGCTGGTGTTTCTGGCTTACCTGAGAGGCCGTCAGAGCCCCCGTGCGCGTTCTATGTGAAAACTGGAAGATGTAAATTTGGTGCAACATGTAAATTCCA TCACCCTAAAGATATCCAAATTCAGCTGTTGGATGATCTGAGTCATACTGTGCAACAGACACAAACAAGTTTTATGATGGAGGGGGCAATGGTAGATACA CAAACAATTAAACCTCTTATGCCTCCACTATTCCAAAATAGCAAAGGGCTTCCTGTAAGACTGGCAGAAGTGGATTGTCCATTCTACATGAAAACTGGCA GTTGCAAGTATGGTGCCTCTTGCCGCTACAATCATCCTGACAGGACCGTGGGCCCTTCCGTTTTGGCATCCTCGGCTGCTTATCTAAATATTGGAGCTAG AAATCCTGCCACAACTGTTTATCAAGCTTTTGACCCGAGATTATCAAACCCAATGTCTCAGGTGGGAATGGCGGAAACTATCTATCCCCAGCGGCCTGGA CAGATTGAATGTGATTACTACATGAAAAATGGCGTGTGCAAATTCTTGGAAAGATGCAAGTTCCATCACCCAATTGATCGCTCAGCACCATTACAACAAA CTGTTAAACTCACTCCTGCAGGATTACCTAGGAGAGAGGGTGCTGTGATTTGTCCATATTATTTGAGAACTGGCACATGCAAGTATGGTGCAACATGCAA ATTTGATCACCCACCACCTGGAGAAGTTATGGAGATGGCAAAATCGCAAGTAACTTCTACAACCAATGAAAACTTATCTGGTGCTGCTCAGTAATGGTAT TGAGATCTTGTATGAAAGTTCACTTTCTATTTTTTGAGCCTATTTTGGCCTTGTTTTTTATTCTCTTCTTCCATGTATCACAATTTGAACAGCTTTGGCC GAAGACCTACTTTACTTCCTCTAATGACTAATTTCTCATTTGTGATATGATGTGCTTTCTTCAATGGCCAGTTGACCTGCAAAATGCAATTCAATACTAG CTGGATTGTGCTTTGTAATAGGGTTTAG
• Tissue: pods
• Gene name: LI_gene_163354;
• Additional information: details;

Expression of Ll_transcript_420410

FPKM

• PAB: 0
• PNAB: 1
• PS1: 1.1
• PS2: 1.3
• PS3: 1.1
• PW1: 0.8
• PW2: 0.6
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420410

• Blastp: Zinc finger CCCH domain-containing protein 37 from Arabidopsis with 59% of identity
• Blastx: Zinc finger CCCH domain-containing protein 37 from Arabidopsis with 56.74% of identity
• Eggnog: zinc finger CCCH domain-containing protein(ENOG410YAW6)
• Kegg: Link to kegg annotations (AT3G12680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432315.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;