Id Trinity | TRINITY_DN48700_c0_g1_i8 |
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Name Transcript | Ll_transcript_420414 |
Sequence | CTCACTCATTTTTCATCTCTCATTTCTGTTAGTGTTTGAGTACAGTAAAGAATGTGTGAGGAAAAGAAAGAGTAACAAAAAAACACACACAAAGTTACTT CCATTGAATTTTTACTGTTAAAATGGAAAACCACATTGATAATCACGCTTATAGCCCTACCAACTACACTTTCACTGTTTCTCCAACCCGAACCACAATG TTCTTCCCCCGCTACCTCACCGCCTCCGCCACCGCCACCTCCGACGCCGACATTTCTCCACCCGCTATTCCTTCTACAATCTCTCCCTTCTTCTCTCAAC CTTCTCTTCACGCCAAACGCTCTTTTTCTCAAGCACTCTACCGTCCGACCATTTCGGGTATCCAAAAAACAATTGAGCAAAATGAAGCTTGGTATTCTAC AAACCCACTAGCCAAACGCCCTAGATATGAAAGTGGGAGCAATTTGCCTATATATGCACAAAGGCCAGGGGAGGAGGATTGTGCCCACTATATGCTCACA AGAACCTGTAAGTTTGGAGAGAGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGAGGGTGGAATCCCAGATTGGAAAGAGGTGACTTTTTATTGTTATT ATTTATGCCTATTAATATAATATCTTATTTTATAGTACATTTACTATTGGTTAATGCAACGTCGCATGTATCCGCACTATTTTATATTTACACAAAATTA TAGAATTGAGCATATATGTATATATGAAGTGCTATATTATATATATTAGTTTCACCTTGACTATTTCATTTTATTACACTTGACATAAAATTTTTGATAT CTACATATGTCAGTGTCCAACAGTGTATGGAGAAGTATTTATAAAGTATGAGAGAAAAAAGGTGGTGCATATATGTCCTGTACGATAGTATAATTGTAGC ATTCTACAAAAAAGTACAGTTGTTGTATATCCTCTTCTTTCTTAATGAAGTTCTTTTTCTATACAATAATAATAATAGCAGTACAGCTATATAAAAATTT AAAACTAATAATAATCATAATAATACTAATGAAGACTAATAACTAGACCGAACATCTCAACAATCTGCCTGAAGTTGGAGCATGTAAATCATATGCACAT AGCCTTATAATCATAACTAGTTTGAGTACTTATGAGAAACTCGTTAAGGCATATATTACTTGGTTGCTTGATCTAACGAAAGTAATAGAGAAATTTCCTG ATAAGATGTTATGGGGGGTAAAATGGAAATTCACCTCTATATGATTAGTCCTCTCATTAAAAATTGAGTTGGATGCATTATGTAAGGCAGCTTGGTTGTC AAATTTGAGTTGCATCTATTGTACTTCCTCGAACTTCAATTCTTGAAGCAAATATTATAGCCATGTACATATATTGGTTGAACATGGCTTAGTAATCTGC TTTTGTGCTTGACCTGTCAAAAAAAGTCTATATATGCCTAGAGATTGAAGATATCTTTTTTGTTTCCCTGATTTCTTGTTGTTCTTTTTTGTATCTGTTG TTCAAGGAGGTCAAATGTTTTTTTCTTGCTATTTTTTCATATTTTCCCTCGTTCATTGCTTCTAATGAAGTTTCTTATGTCAGAAAAGAGTGTTGTCACA TGATTGTTGACAACTTTTTCACTTATTTGGAGTTGGGCTAGTTAATATATACCTATCTTTGAAATGGTCATTGTAGTCAACTGCTTAACTATGTTACGAT GATTTTATTACTAAGTTGTGAATCTACTTTTGTTCTAGTAGTACCCAGTGCCCTTTAAGTTTAAGTTCGGCGTGAGAGATTATGTGTTTAAACTTTAAAA AATGCATGGACAGTTTACTTTTATGCTAGGATAACAACTGTGTTCCAGTTGTTTCATGTATTGACCTAAATATGGCATCTGTATCTGGTTTATTTTTACC ATTCTTATATTTTATAATTTGTCTCTATTGGCACACAAAAATTGCCACAAAGGTGAAATATATTTTGCCACAAAGAAAGGTGAAATATAATCATCTAGCA AGTTTAATTCATAAATATGAAGTGGTTTTACTAACTAATGACTATGACAAACATGGTCGGTTTATGCCTGATTTAGGTTCCAGATGTTACAACTGAAACT CTTCCTGAGAGACCAGGAGAACCAGATTGTCCATACTTTGTTAAAACTCAGAGATGCAAGTTTGGTCCAAGGTGCAAGTTTAATCATCCAAAGGTTTCCT CTGAAAGTGCTGGTGTTTCTGACTTACCTGATAGGCCGTCAGAGCCCCCGTGTGCGTTCTATGTGAAAACTGGAAGATGTAAATTTGGTGCTGCATGTAA ATTCGATCACCCGAAAGATATCCAGATTCAGCTGTCAGGTGAACTGAATCATGCTGCCGAACAGACACAAACAAGTTTTATGATGGAGGGGGCAACAGTA GATACGCAAACAACTCTTACATCTCCACTATTTCAAAATAGTAAAGGACTTCCTGTTAGACTGGGAGAAGTGGATTGTCCATTCTACATGAAAACTGGCA GTTGCAAATATGGTGCCTCTTGCCGCTACAATCATCCTGACAGGACAGCAATTAATCCGCCTATTGCTGCATTAGGCCCTTCTGTCTTGGCATCCTCGGC TGCAAATCTGAATATTGGACTTATAAATCCTGCTGCACCCGTTTATCAAGCCTTTGACCCGAGGTTGTCAAACCCAATGGTAATGTTGATTGCCTACACC TCTTGGATGGAGTCTTCCTTTTATTTAAATAAATATGTTATTATCGGAACCTGGTACATGAGACTGACACATAATAGATTGAATCTATTGGTATTAACAC CTGGAATATGGAATGCGGCAGTTCCCACTTAGTGCGGTATGAGGAAGGTAAATGTAGATAATAATATTCCAGGGCTCCCACCTGGAAAATGGAATGATAA TACTATTTTTGTAACTTACATCTTTCGATCTGAGCGAATATTAAGTAATCGATTGTGGTTATATGTTGGTTTACTGTGAACTTTGGTTATTCTCAGTGTT CACCTTTTTATATTGCTTGACCCTTATAGATATTGGGGTTTTGTGCTTGAATATATGTTTTCTGTACATGTCCAAACTCTTTCATTTCTCTTTTCTGTCG CTGTAGCCTCAGCTCACTCTTTTCTGTTTGTTCTCAGAGCCTTTTAGCTTCACTTTCTTCATAATTGCAGTTTCCTCAAATTCAAATTCTTCGTTTTTGG AGTCCCATTTGCCTGTTTGTTATGCTCATCCACTACATTTTATGTGTGTGTAACAAAGATAAGTAAATGTTTGAGTCTTTCAGAACTGAATGCATCCTTG TTGTTTACTCTCAAGAATCCAGGAGGACTACTTTTGAACTCGTCTAGTAGAACTAATAATTTAATTCAATATTTGTAGAAAGAAGAGTATATCAGCTTAG GAAACTAGCCATTCTTAAATTATTATGAGTTGTGTTTCCATGAGGTACCATCATAGATGAACATACTTAAAGGCTAATGCATCTCATGCATGTAACTTGT TTTCCAGTCTCAGCTGGGAATGGCAGAAACTATCTATCCTCAGCGACCAGGACAGATTGAATGTGATTACTATATGAAAATTGGCATGTGTAAATTCGGG GAAAGATGCAAGTTCCATCACCCAATTGACCGCTCAGCACCATCACAGCAAACCGTTAAACTCACTCCTGCAGGATTACCTAGGAGAGAGGGTGCTGTGA TTTGTCCTTATTATTTGAAAACTGGCACATGCAAGTATGGTGCAACCTGCAAGTTTGACCACCCACCACCTGGAGAAGTTATGGAGATGGCAAAATCACA AACCAATGGTGGTGAAGCCAAAGACAATGAAAATGTATCTGCTTCTGCTTAGTAAGTTAGTACAATACGTATTCAGGGGGAAAAAGTTAGTACAATACGT ATTGAGATCTTGCATGGAATTTCACTTTCTATTTTATGAGCCTCTTTTCCTGTTTTTATTTCATATCATGATTTGAACAGCTTTGGTAGAAGACTTATTT ACTTCCTCCAATCACTAATTTCTTATTTTACTTGTATGATGTGCAATTCAATGGCTAGTGGACCTGCTAGCAATGTGTAGTCAATTAACACTAGTAAAAC CTGAATTCAGTCATTGTCTTGTGTACTAATAATTGTTGTGTTAAGTTGGTACTGGAAAAGTGGCGTG BLAST |
Tissue | pods |
Gene name | LI_gene_163354; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420414
Blastp | Zinc finger CCCH domain-containing protein 37 from Arabidopsis with 65.74% of identity |
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Blastx | Zinc finger CCCH domain-containing protein 37 from Arabidopsis with 53.7% of identity |
Eggnog | zinc finger CCCH domain-containing protein(ENOG410YAW6) |
Kegg | Link to kegg annotations (AT3G12680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449304.1) |
Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |