Ll_transcript_420416

• Id Trinity: TRINITY_DN48700_c0_g1_i9
• Name Transcript: Ll_transcript_420416
• Sequence: CACACTCACACAAAACTAAAACGATACCTTAGAGAAACAATAACAATGACAAAATAATCCTAAATGCCAGTCCTCATCTTAATTGTTCCGACACGAGAAT ATAATATATATTATTTATAAACTAATTATTAATAAATAAAGTATGATATGTGAAGTATTATTTTTTTATTGGTAAGAGAATTTAGTAATATCATTTTCAA CAAAAAGAAAAAAGAAGCTCAAGTTTGTTGTTAAAATGAAAACCACATCTACAATGCTTACAGCCCTACCAACTACAGAGTAGTGGTAGCAACAACAACA ACATCCACGACCCGATTACGTGACCCGATTACCACTATGTTCTTTTCACGGCATCTCACCGACACAACCTCCGCCGCCGCATCCGCCACCTCTTTCCGGT TCCCTTCTTCCGCCTCATCCGACGTTGACATTGCTCCTCCTGGTGTTCCTTCTAGAATCCCTTCCTCTACCTCTCACTTATTCTCTCAACCTTCTTCATG GTTCTCTTCTCCCTCTCTTGACCTCAAACGCTCTTCTTCTCAAGCACTCTACCATCCAACCATTTTGGGTATCCAAAACACAATTGGGCAAAATGAAGCT TGGTATTCTACAAGCCCTCTAGCCAAACGCCCTAGATACGAAAGTGGAAGCAATTTGCCTATATATCCACAGAGGCCAGGAGAGAAGGATTGTGCCCACT ATATGCTCACAAGAACCTGTAAGTTTGGAGAGAGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGAGGGTGGAATCCCAGATTGGAAAGAGGTTCCAGA TGTTACAACTGAAACTCTTCCTGAGAGACCAGGAGAACCAGATTGTCCATACTTTGTTAAAACTCAGAGATGCAAGTTTGGTCCAAGGTGCAAGTTTAAT CATCCAAAGGTTTCCTCTGAAAGTGCTGGTGTTTCTGACTTACCTGATAGGCCGTCAGAGCCCCCGTGTGCGTTCTATGTGAAAACTGGAAGATGTAAAT TTGGTGCTGCATGTAAATTCGATCACCCGAAAGATATCCAGATTCAGCTGTCAGGTGAACTGAATCATGCTGCCGAACAGACACAAACAAGTTTTATGAT GGAGGGGGCAACAGTAGATACGCAAACAACTCTTACATCTCCACTATTTCAAAATAGTAAAGGACTTCCTGTTAGACTGGGAGAAGTGGATTGTCCATTC TACATGAAAACTGGCAGTTGCAAATATGGTGCCTCTTGCCGCTACAATCATCCTGACAGGACAGCAATTAATCCGCCTATTGCTGCATTAGGCCCTTCTG TCTTGGCATCCTCGGCTGCAAATCTGAATATTGGACTTATAAATCCTGCTGCACCCGTTTATCAAGCCTTTGACCCGAGGTTGTCAAACCCAATGGTAAT GTTGATTGCCTACACCTCTTGGATGGAGTCTTCCTTTTATTTAAATAAATATGTTATTATCGGAACCTGGTACATGAGACTGACACATAATAGATTGAAT CTATTGGTATTAACACCTGGAATATGGAATGCGGCAGTTCCCACTTAGTGCGGTATGAGGAAGGTAAATGTAGATAATAATATTCCAGGGCTCCCACCTG GAAAATGGAATGATAATACTATTTTTGTAACTTACATCTTTCGATCTGAGCGAATATTAAGTAATCGATTGTGGTTATATGTTGGTTTACTGTGAACTTT GGTTATTCTCAGTGTTCACCTTTTTATATTGCTTGACCCTTATAGATATTGGGGTTTTGTGCTTGAATATATGTTTTCTGTACATGTCCAAACTCTTTCA TTTCTCTTTTCTGTCGCTGTAGCCTCAGCTCACTCTTTTCTGTTTGTTCTCAGAGCCTTTTAGCTTCACTTTCTTCATAATTGCAGTTTCCTCAAATTCA AATTCTTCGTTTTTGGAGTCCCATTTGCCTGTTTGTTATGCTCATCCACTACATTTTATGTGTGTGTAACAAAGATAAGTAAATGTTTGAGTCTTTCAGA ACTGAATGCATCCTTGTTGTTTACTCTCAAGAATCCAGGAGGACTACTTTTGAACTCGTCTAGTAGAACTAATAATTTAATTCAATATTTGTAGAAAGAA GAGTATATCAGCTTAGGAAACTAGCCATTCTTAAATTATTATGAGTTGTGTTTCCATGAGGTACCATCATAGATGAACATACTTAAAGGCTAATGCATCT CATGCATGTAACTTGTTTTCCAGTCTCAGCTGGGAATGGCAGAAACTATCTATCCTCAGCGACCAGGACAGATTGAATGTGATTACTATATGAAAATTGG CATGTGTAAATTCGGGGAAAGATGCAAGTTCCATCACCCAATTGACCGCTCAGCACCATCACAGCAAACCGTTAAACTCACTCCTGCAGGATTACCTAGG AGAGAGGGTGCTGTGATTTGTCCTTATTATTTGAAAACTGGCACATGCAAGTATGGTGCAACCTGCAAGTTTGACCACCCACCACCTGGAGAAGTTATGG AGATGGCAAAATCACAAACCAATGGTGGTGAAGCCAAAGACAATGAAAATGTATCTGCTTCTGCTTAGTAAGTTAGTACAATACGTATTCAGGGGGAAAA AGTTAGTACAATACGTATTGAGATCTTGCATGGAATTTCACTTTCTATTTTATGAGCCTCTTTTCCTGTTTTTATTTCATATCATGATTTGAACAGCTTT GGTAGAAGACTTATTTACTTCCTCCAATCACTAATTTCTTATTTTACTTGTATGATGTGCAATTCAATGGCTAGTGGACCTGCTAGCAATGTGTAGTCAA TTAACACTAGTAAAACCTGAATTCAGTCATTGTCTTGTGTACTAATAATTGTTGTGTTAAGTTGGTACTGGAAAAGTGGCGTG
• Tissue: pods
• Gene name: LI_gene_163354;
• Additional information: details;

Expression of Ll_transcript_420416

FPKM

• PAB: 12.5
• PNAB: 10.7
• PS1: 12.1
• PS2: 8
• PS3: 9.8
• PW1: 11.8
• PW2: 9.1
• PW3: 7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420416

• Blastp: Zinc finger CCCH domain-containing protein 37 from Arabidopsis with 54.12% of identity
• Blastx: Zinc finger CCCH domain-containing protein 37 from Arabidopsis with 60.33% of identity
• Eggnog: zinc finger CCCH domain-containing protein(ENOG410YAW6)
• Kegg: Link to kegg annotations (AT3G12680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449302.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;