| Id Trinity | TRINITY_DN48702_c4_g5_i4 |
|---|---|
| Name Transcript | Ll_transcript_420727 |
| Sequence | GAAAAAGTACAAGGTTGATTTTACTCACAATTGGTTGCATATTGTATGACTTTGCTCACACTATATTGGTTGCTAACTATGTGAGCAAGGATTCTCTCTA ATAATTGAGAGGTATGAAATTTTGTGTGAGTTCTTCCACAGTCTGGATTCATCGATTCGCCTGACTCAAATGAAAGGCCGAATGCCGAATTTCACGAATA TTGCACAGAAGATTGAATCTTTAAGTGATAGGAGGTTTACACATAGCCATTTGGCCCAGTTGAAATCTATCTTACCTGAAGGGATTCTGATTAAGAAGGT ACTCGTGTTTGACGAAAGGACGAGTAGTATGAAGCCAGACCTACATGTTACTATAGATCGTGATGCAATATTGTCTTCTGCGACGATGCTTCCTAAATGC GAGAGTTTGTGTGAGAGTATGCAAATGAGGCTATTATTTCGCATACAGCTAGCAGAATTTTGCAAATCTCATCCTGAGGGTTATGAGATTCCAGAAGCTG AATTGCCTGATCCATTCAATTGTCCAAAGCAAGAATTGAAAACTCCCTCCTTAACTCACCCTCCAACAATATTGTCATCGAGGATGCTGGATAATGACAT TGTAGATTATACAGCGTCTGCTAACAGAGAAGAAAGATTGTCAGTACCTATCAATTCATCAATTGAAGCACTTAACCCGAAACCGGCAGTAGCCTCTCAC ATGCCTCAATCTTTCAGAAGGCGTTTTTTGCAAAAACCTATGGAAAATGAAACAGATAGTATCCAGAAAATTTTGCCATCAGATTCATTCCAAACCCCAG CTGATCCAGTTTCTGAGTCGAACCTGAAGAAAAATTCCACATCCCCAATTAAGTTTGTTTCAGAAGCAGCTGATAGTGAAATATGTCCAACAATCTATGC TTCTTCAGGTTACTTTGAATCATCTACTGCTCCATGTGTCGCCACTCCAACCAAAATCATTGACTTTACATCAACTCCAGTTAAACATGTTTTAACTCCA TCCAGGCTGATGGTAGCGACTCCTGAAATTCCTCCACCCAAAAAACATTACCTTAGCCCGGATGACAAGTCTTCCCGTTCAATGAGCAAATTAGTTAGGC GCCCACCTCGTTCAAGGTCACTGAAATTTGACTGTCCAATGGAAAATAAGGAGACACAGGATGAAGAAATTGCTGGTGGCTTATCAATCAATGATGATAT TTTTGATATCCTCCCAAAGAATCTTCTCGAATCGATTCGAGAAAAGGAAAGATTGACAATGGAGGAAAGAGATCCAGTTATCTCACAAGCAAAGAGACGA CAAAAAATGGTTGCCAGCCTCCCTAAGCTCTTTAACATGATTCACCTCTTGTTGCAATCAATGAAATGTTCTCTCATCATGAAAGAGGAGCTTGTAGGCA AGATAATCTCAAGCCATCGTGATATTGTTGACAGAAGAGAAATTGAAGAACAGCTGAACTTGTTATTAGTACTAGTACCAGATTGGATTTCTGAGAAGTT GACCTCTTCTGGGGACATCCTCTTCAGCATTAATAAAACATTGAACCCTGGCACCATAAGAGCATCACTTGAACAAGCAAAGTGAGCAATATGCTGTATT AGAAGTCATGCTGGAGGTTTATCAAGCCTGTGATGTATATTACCCCTTTTTTGGGTTGCTTGTAAAATTTTCAATCTATTTTCTTTTGGGAATAATATAT CATTGGAGATGTGAAATTGGCATATCAGCTTTTAGCTTTTTTTTCATAGATAGTCTATAACACAGATAGACCAGTAGATATGAAACACACCCCTTTTCAT TCACTTATGGTGGATTGGCAATCTTTTTGTAATAAAGACATCATGCAAAATAATTTAAGCTGATCAATTATCTTTTTCTTGTAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_163384; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420727
| Blastp | CDT1-like protein a, chloroplastic from Arabidopsis with 38.6% of identity |
|---|---|
| Blastx | CDT1-like protein a, chloroplastic from Arabidopsis with 38.98% of identity |
| Eggnog | Chromatin licensing and DNA replication factor 1(ENOG410XT37) |
| Kegg | Link to kegg annotations (AT2G31270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459716.1) |
| Pfam | DNA replication factor CDT1 like (PF08839.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |