Ll_transcript_420950

• Id Trinity: TRINITY_DN48705_c0_g4_i1
• Name Transcript: Ll_transcript_420950
• Sequence: CTTCATTCCATTCCTAGATTAGGTTTAAGTTAAGCTTCCACCCCAAACACCCCCTTTCATAGTGAACTCTAAACCCTAACTGAACCCTATCTTTCTTTCT TTCCACACCGCACCAATGGCTCTCTCCAAAGCCACCTTCCTCCTCCACCTCCGAACCGCCGCCACACCCCGCCGGCAACCACCCTCCACCATCTCCCTCC GCTTCCTCTCCTTCTCCTCCCCCGAAGAAGCCGCCGCTGAACGGCGCCGCCGCAAGCGCCAGCTCCGCATAGAACCACCTCTCTCCGCTCTCAACCGCAC CCAAACCCAAACCCAATCCAACCCCAACAACAAATCCCAAACTCCATACTACCTTAACCCCAACAACCCTAAACTCCCCGAACATGTTACTGCTCTAACC GGTAACCGTCTCAACCTCCACAACCGAATCTTAACCCTAATTCGAGAAAACGACCTCGATGAAGCTGCGTTGTACACGCGCCATTCCATTTATTCAAATT GTCGTCCTACGATATTCACTATCAATGCTGTTTTATATGCTCTGCTTCGTCAATCGAAGTATTCTGATTTGCTATCGTTGCATCGATTTATAACGCAGGC TGGGGTAGTGCCGAATATCGTCACTCATAATTTGATTTTCCAGACTTATCTTGATTGCCGCAAGCCGGATACGGCTTTGGAGCATTACAAGCAGTTTTTA AATGATGCCCCCATGAACCCTAATCCGACTACTTATCGAATTTTGATCAAGGGTTTGGTTGATAATGGTAAATTGGAACGTGCCTTGGAGATCAAGGAAG AGATGGATTCTAGAGGTTTTGCTCCTGATCCTCTTGTTTACCATTATTTGATGCTTGGTTCTGCTAGGGGTTCGGATTCGGATCGTGTTTTTGAGCTTTA CGAGGATTTGAAGGGGAAATTGGGTGGTGAGTTGGACGATGGGGTTGTGTATGGGAGCTTGATGAAAGGGTATTTTCTAAGGGGGATGGAGAAGGAGGCT ATGGAGTGTTATGAGGAAGCTCTTGGGGTGGATTCGAAAGTGAAGATGAGTGCTGTGGGTTATAATTCAGTGCTTGATGCATTGAGCAAGAATGGGAAGT TTGATGAGGCTTTGGTGCTGTTTGATAGGATGATAAGGGAGCATGCGCCACCGAGAAGTTTGGCGTTGAATTTGGGGAGTTTTAACGTGATGGCGGATGG ATATTGTGCTCAAGACAGGTTTAAGGAGGCAATTGAAGTGTTTAGGAAGATGTGGGAGTTTAGGTGCAGGCCAGATACCTTGTCGTATAATAATTTGATT GAGCAGTTATGTAACAATGGGATGATCGTGGAAGCTGAAGAAGTTTATGGGGAAATGGAGGGCAAGGGAGTGAACCCGGATGAGGTTACTTATGGATTGT TGATGGATACTTGCTTCAAGGAGGATAGGCCTGATGATGCAGCTGGATATTTTAGGAAGATGGTCGATTCAGGGCTGAGGCCGAACTTGGCTGTTTACAA TAGGTTGGTTGATGGATTAGTTAAGGTTGGGAAGATCGATGAGGCGAAGTCTTTCTTTGAGCTAATGGTGAAGAAGCTCAAGATGGATGTCGCTAGCTAT CAGTTCATGATGAAGGTGCTGAGTGAGGCAGGAAGGTTGGACGAGGTGCTTCAGATCGTTGATACATTGTTGGATGACAATGGTGTTGATTTTGACGAGG AGTTCCAAGAATTTGTTAAGGTGGAGTTGAGGAAAGAAGGGAGGGAGGATGAGTTGGCCAAATTGATGGAGGAGAAGGAAAGGCTGAAAGCTGAAGCAAA GGCTAAAGAGGCTGAGGCAGCTGAAGCTGCTAAAAGAAGTGCAAGAGCTGCAGTAGCTTCTTTGCTTCCTTCCAAGTTGTTTGGGAATAAGGAAACAGAT TCAGACTCTAAACCGGAGGATGTACTTGGTGCCGAGTCAGAGTCTACAGAGAAAATAACCGAAGCTGAGGGTTCAGGTGATGGTGAGGCTAAAAGTGATG ATGCAAGTGAACAGGTAACAACAGCTTGAAGTAGCAACTTCATGATGCTTGGATGAGGAAGTGTAGTGTTTCTGTTTCTTTGTCAAAAGAGTTTGGATCA TTAACTTATGTTACCACCTTTTCGAATATTCTACATGTAATTAAATTGCTGGAAATTATTATGCAATTTGCAACCTACTATTTGGTATAGGTCTAAAACT TAATGAAACTTCAATTCCTCTTCCCCTAAATTGGTGCTACAAAGTTAGCCATTGGTGTTGTACATGTTTTATGTCTAAAATGGAATAATGTTTATCTAGA AATTATGATGGATTTTCTTAAATTGCAAGTGAAGCAACATTGACATTGGTGTAAACAAGTAAAGGCAAGTTGGAAGAATGATGAAGCAACTAAAGTTATG TATACCACTTTCGGCTGTGAACATTATATTGCC
• Tissue: pods
• Gene name: LI_gene_163400;
• Additional information: details;

Expression of Ll_transcript_420950

FPKM

• PAB: 3.3
• PNAB: 12.7
• PS1: 13.6
• PS2: 9.3
• PS3: 13.3
• PW1: 9.2
• PW2: 8.8
• PW3: 8.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420950

• Blastp: Pentatricopeptide repeat-containing protein At3g49240, mitochondrial from Arabidopsis with 60.51% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g49240, mitochondrial from Arabidopsis with 62.75% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G49240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417345.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;