Ll_transcript_420953

• Id Trinity: TRINITY_DN48705_c0_g4_i2
• Name Transcript: Ll_transcript_420953
• Sequence: CCTAAACAAACAAACAGGCTTTATTGTATTCCTAGATCAGGATTAACCTAAGCTCATACTCCAAACACCTCCATTCATCATCCTCATCCTCTATAGTGAA CTCTAAACCCTCACTGAACCCTATCTATCTTTCTATCCCATACCCATGTCTCTCTCCAAAGCCACCTTCCTCACCCACCTCCGAACCACCGCCAGCAACC GCCGCCTCCACCTACCCTCCACCATCTCCCTCCGCTTCCTCTCCTTCTCCTCCCCAGAAGAAGCCGCCGCCGAACGCCGCCGCCGCAAACGCCAACTCCG CATCGAACCCCCTCTCTCCGCCCTCAACCGCACCCAAACCCAAAACCAACCCAACCAGAAATCACAATCCCCCTATTACCTCAACCCCAACAACCCTAAA CTCCCCGAACATATTACCGCTCTAACCGGTAACCGTCTCAACCTCCACAACAGAATTCTCACCCTGATTCGCGAAAACGACCTTGATGAGGCTGCGTTGT ACACGCGCCATTCAATTTACTCTAATTGCCGTCCCACTATCTTCACCATTAATGCTGTTCTCTACGCGCTCCTTCGGCAGTCGAAGTATTCCGATTTGCT TTCGCTACATCGGTTTATAACTCAGGCCGGGGTAGTGCCGAATATTATCACTCATAATTTGATTTTCCAGACTTATCTTGATTGCCGCAAGGCAGATACG GCGTTGGAGCATTACAAGCAGTTTTTAAATGATGCTCCAATGAATCCTAATCCAACTACTTATCGAATTTTGGTTAAGGGGTTGGTTGATAATGGTAAAT TGGAACGTGCCTTGGAGATCAAGGAAGAAATGGATTCTAGGGGTTTTGCACCTGATCCTCTTGTTTATCATTATTTGATGCTTGGTTGTGCTAGGGGTTT GGATTCCGATCGTGTTTTTGAGCTTTACGAGGATCTGAAGGGGAAATTGGGAGGGGTTTTGGAAGATGGGGTTTTGGAAGATGGGGTTGTGTATGGGAGT TTGATGAGAGGGTATTTTTTGAGGGGGATGGAGAAGGAGGCTATGGAGTGTTATGAGGAAGCTGTTGGGGTGGATTCAAAATTGAAGATGAGTGTTGTGG GTTATAATTCGGTGCTTGATGCGTTGAGCAAGAATGGGAGGTTTGATGAGGCTTTGAAGTTGTTCGATAGGATGACGAGGGAGCATGCGCCGCCGAGGAA GTTGGCCATCAATTTGGGGAGTTTTAATGTGGTGGTGGATGGGTATTGTGGTCAAGGGAGGTTTAAGGAGGCGATTGAAGTTTTTAGGAAGATGGGGGAG TTTAGGTGCAGGCCCGATACATTGTCGTTTAATAATTTGATTGAGCAGTTGTGTAACAATGGGCTGATTTTGGAAGCTGAAGAAGTTTATGCAGAAATCG AGGGGAAGGGCGTGAATCCTGATGAGGTTACTTATGGATTGTTGATGGATACTTGCTTCAAAGAGAATAGGCCTGATGATGCAGCTGGATATTTTAAGAA GATGGTGGATTCGGGGCTGAGGCCGAACTTGGCTGTTTACAATAGGTTGGTTGATGGCTTGGTTAAGGTTGGGAAGATCGATGAAGCGAAGTCGTTCTTT GAGTTAATGGTGAAGAAGCTCAAGATGGATGTCGCTAGCTATCAGTTCATGATGAAGGTGTTAAGTGAAGCCGGAAGGTTGGATGAGGTGCTTCAGATCG TTGATACGTTGTTGGATGACAATGGAGTCGATTTTGACGAGGAGTTCCAAGAGTTTGTTAAGGTGGAGTTGGGGAAAGAAGGGAGGGAAGATGAGTTGGC GAAATTGATGGAGGAGAAGGAAAGACTAAAAGCCGAAGCTAAGGCTAAGGAGGCTGAGGCAGCCGAAGCTGCTAAAAGAAGTGCAAGAGCAGCAGTTGCT TCTCTGCTTCCATCCAAGTTGTTTGGGAATAAGGAAACGGATTCAGAGTCTAAACCTGAGGGTGAGTTTCAAGCTCTTAAAGAAGAGAGTGCTGAGACAG AACCTGCAGAGAAAATAACTGAAGATGTGGGTTCAAATGATGGAGAGACTAAAAGTGATAGTTCGAGAGAACAGGTAACAGCTTGAAGCTGCAGCTTCAT GTTTAGTGTGTGTTTTTCTGTCAAAATAGTTTGGATCTACCAACTTTTGGATCATTCTAATGTAATTAAACTGCTGATTTTTTTATGCAATTTACAATTT CGTATTAGTGGAGTATGGGTCTAAATTTATTTGAAATTTCATTTCCTCTCCCCTTAAGTTGCTGCTGCAAGATTAACCATTGGTTTTGTGATGTTTTATG TTTAAAAACTAAGTGCTTCCCAGAAATTATGAACTTCCTTAAATTGCAAGTGAAGAAAGATGAAGCG
• Tissue: pods
• Gene name: LI_gene_163400;
• Additional information: details;

Expression of Ll_transcript_420953

FPKM

• PAB: 0.4
• PNAB: 7.7
• PS1: 7.1
• PS2: 5.7
• PS3: 6.2
• PW1: 5.6
• PW2: 5.1
• PW3: 3.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420953

• Blastp: Pentatricopeptide repeat-containing protein At3g49240, mitochondrial from Arabidopsis with 60.88% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g49240, mitochondrial from Arabidopsis with 63.45% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G49240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415287.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;