Id Trinity | TRINITY_DN48711_c2_g1_i5 |
---|---|
Name Transcript | Ll_transcript_419681 |
Sequence | CAGGAAAGTGAGTACCAATAAGCTAAGGCCTGTGGCGTCAAACCATCAGAACACCAAATTCTCTATCCCTGTCTTCATTTCCACTTCTCTCTCTTTGCTT CTCACTCCTGAGAGAGGACAGAGAGAGGGCCAAATCCAATTCCATTCACCTTCCATAATTGACCTCTCCGTCACCGGTCGAAATTCCGATCACCGCCGGC AAAATCATCCTCTATCATAATCCATCAACACGATTCCCTTCTTCTGCTGTAAACCCTAAAACTTTGATGCGACGATCGAATGCTCGAACTCGGGTTGGTT CAAATCGTAACAAAGTGGACCCGATGTTGAAGCTCCAAACCCGTTCCTCTAACCCACGCCCTAACCTCTTCGCTCGCAACCCTAAACCCTCCCCTAACTC ATTCCGATCCAACTGCATAACTTTCTTCTCTCTCTTCTTCATCTTCCTCTTATTCATCTCCTACAGTTTCTTCTCATTCTCATCCAAATCAAACAATAAC AACAACAGTTATAGAAATCATCAACAGTATCAAATCATAATCGACGGTGGTAGCACCGGTTCCCGGATTCACGTGTTCAAGTACCGCGGTGTCGATAGCT TTGATTTCGGGAACGATGGGCTGGCGTCGATGAGGGTGAGCCCGGGGCTTTCGTCGTTCGCGGAGGATCCGGATTCGGCAGGGCGGTCGCTGACGGAGCT GGTGGTGTTTGGGAAGGGGCGAGTGCCGAGCAAGAGTTGGGCGGTGACGGAGATTCGGCTTATGGCCACGGCTGGGTTAAGAATGGTGGATGTGGGAGTG CAGGGGAAGATTCTAGAATCGTGTAGGAAGGTGCTGCGTGAGTCTGGGTTTCTGTTTAGGGATGATTGGGCTTCTGTCATCACAGGTTCTGATGAAGGAA TATATGCTTGGGTTGTTGCTAATTATGCACTTGGTACTCTTGGGGGTGATCCGTTGAATACGACTGGGATTATTGAACTTGGTGGGGCTTCTACTCAGGT GACCTTTGTATCAAGAGAACCAATGTTGTATGGATTCTCGCGTGCTGTTAAATTTGGGAACACCACTTACAACCTTTACAGCCACAGCCTTCTTCATTTT GGCCTGAATGTTGCTCATGACTCATGGAGAGAAGCACTTATATCAGGAGAATATAACTTGGCTTCTCAATCTCTTCAGGCAGGGTTGCATATAGATCCTT GTACTCCTACAGGGTACTCTCATAGTGTTGAGTCATGGAAGTTCTCTCATGGCTCACTGAGCAATAAAAGGCAATTTAAGTCCACTGTTCAAACAAGGGG AAACTTTTCCGAGTGCAGGTCTGCAGCATTGATGCTACTGCAAAAAGGAAAAGGTGAAATTTACTTTGACGGGTTTGTATTGTTAGATTCCCTTGAAAGA GATACTTTCTTTACTTTTTGTTTTCGTATTAAAGTTTTCATTTTTGACATACGCAGAAAAATGTTCCTATCATCGTTGTGACATAGGATCAACTTTCATA CCTAAGCTTCAAGGGAAAATTTTGGCGACTGAAAATTTCTTTTACACTTCAAAGGTTCTTTTTATGCTTGATAGTTAATATTTATGCTTCTTTTAATGTT GTCTAGCATAATTGTACACTTTGTTCTTGTCTAAAATGGATGCATTCTGATGTTAGACTGTTAGTAATGTACTGGAAATCCTATTATTTCTTGAATACTT GACTCACAACTTTCCCAGCTCTAAATTTGCTAGTTTGACAATTGATAGTTTGGTACACCCTTCTCACACTGATTCTTGATTCTTTGATGCTATGCTAGTT TTTTGGATTAGAACCAAGGGCATATCTGTCTAAGTTGATGAGTGCTGGGCAAGAATTCTGTGGAGATGATTGGTTAAGGCTGAAGGAAAAATACCACTCC CATGATGAGGAAGAGTTGCTTCAGTATTGCTTCTCTTCAGCATACATTGTTGCTCTGCTTCATGACGGTCTTGGAATTGCATTGGATGATGAGAGGGTCA AAGTTGCTAATCAAGTTGGAAATATTCCACTTGATTGGGCATTGGGAGCTTTTATTCTTCAAACCACGGCTGCTGCAGATGCACAGAACCATGGCTGGAT TACTACCATTTTCAGTGATGAATCACCTACTCTTGTCAGACTTATTGGTATTCTTACAATATTGCTGTTCACAGCTTGGTCTATATCTAAGTGGAGGAAA CCACAGTTGAAGACAATTTATGATCTAGAAAAAGGACGATACATAGTTACACGAGTTGTTAGATAATAGTTGCAGTAGATCGGATGTTCTTGTTTTGCAG ATTTGGAGGAACTGTTGTGGTTATGATGAAAATAGTTACCCATTCTCACTTGGTGACCATGTCATATTGTGAGGCCATTATAGTGTGGCTCAGATTGTTC ATCATTGGATTTGGATGCGGCATGTGGAGTTACCTCTTGGGAAGGAGTAGTTTTGTGTGTAGTGGAATCCAGGAACTGGGTGTTATGCCATTCACTTCAC TGGTTATATAAAACAACAGTAGGTGAAGGAGTTTAGGGGGATACTGGATGCTGCATCATTCAACACAAATACCCTGTTATGATCTTTGTACCAAACTCAG CATAAAAGTTACAGAACTGATGTTTGTCAATTGGCACATGCAAAGAAAAAGCTTTCTACATTACTTGTCCTGAGAAGGTAATTTTGCAGAAGCTGATCTT GAAGAATTTGGAACTTATCATAAATATTGAAGTCAATTGGTTGTATGAATACGTGTTAGGCGTATGTTCAATTCAAAGTTATTGTACTTGTGTTCAAAAT CTAATGATTAGTATATAAAGACCATCCCAACTGTGGAAAAAAGGTTGTTAATGGCGCATTGTTTATATTTCAACAGCTTAAGCAGTTAGACCCAAACTTT ACTTCAATTATGCAATTTTACTATTTGTCCTTAAGGTTAAATGAACTCTGCAAACATGCAATTTTCTAAAGTCCTGTAGTATTTATTCCACTCCTAATAC ATGCAATTTTCTTTTAGAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_163435; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_419681
Blastp | Probable apyrase 6 from Arabidopsis with 51.75% of identity |
---|---|
Blastx | Probable apyrase 6 from Arabidopsis with 50.68% of identity |
Eggnog | Ectonucleoside triphosphate diphosphohydrolase(COG5371) |
Kegg | Link to kegg annotations (AT2G02970) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461395.1) |
Pfam | GDA1/CD39 (nucleoside phosphatase) family (PF01150.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |