Ll_transcript_419684

• Id Trinity: TRINITY_DN48711_c2_g1_i8
• Name Transcript: Ll_transcript_419684
• Sequence: CAGGAAAGTGAGTACCAATAAGCTAAGGCCTGTGGCGTCAAACCATCAGAACACCAAATTCTCTATCCCTGTCTTCATTTCCACTTCTCTCTCTTTGCTT CTCACTCCTGAGAGAGGACAGAGAGAGGGCCAAATCCAATTCCATTCACCTTCCATAATTGACCTCTCCGTCACCGGTCGAAATTCCGATCACCGCCGGC AAAATCATCCTCTATCATAATCCATCAACACGATTCCCTTCTTCTGCTGTAAACCCTAAAACTTTGATGCGACGATCGAATGCTCGAACTCGGGTTGGTT CAAATCGTAACAAAGTGGACCCGATGTTGAAGCTCCAAACCCGTTCCTCTAACCCACGCCCTAACCTCTTCGCTCGCAACCCTAAACCCTCCCCTAACTC ATTCCGATCCAACTGCATAACTTTCTTCTCTCTCTTCTTCATCTTCCTCTTATTCATCTCCTACAGTTTCTTCTCATTCTCATCCAAATCAAACAATAAC AACAACAGTTATAGAAATCATCAACAGTATCAAATCATAATCGACGGTGGTAGCACCGGTTCCCGGATTCACGTGTTCAAGTACCGCGGTGTCGATAGCT TTGATTTCGGGAACGATGGGCTGGCGTCGATGAGGGTGAGCCCGGGGCTTTCGTCGTTCGCGGAGGATCCGGATTCGGCAGGGCGGTCGCTGACGGAGCT GGTGGTGTTTGGGAAGGGGCGAGTGCCGAGCAAGAGTTGGGCGGTGACGGAGATTCGGCTTATGGCCACGGCTGGGTTAAGAATGGTGGATGTGGGAGTG CAGGGGAAGATTCTAGAATCGTGTAGGAAGGTGCTGCGTGAGTCTGGGTTTCTGTTTAGGGATGATTGGGCTTCTGTCATCACAGGTTCTGATGAAGGAA TATATGCTTGGGTTGTTGCTAATTATGCACTTGGTACTCTTGGGGGTGATCCGTTGAATACGACTGGGATTATTGAACTTGGTGGGGCTTCTACTCAGGT GACCTTTGTATCAAGAGAACCAATGTTGTATGGATTCTCGCGTGCTGTTAAATTTGGGAACACCACTTACAACCTTTACAGCCACAGCCTTCTTCATTTT GGCCTGAATGTTGCTCATGACTCATGGAGAGAAGCACTTATATCAGGAGAATATAACTTGGCTTCTCAATCTCTTCAGGCAGGGTTGCATATAGATCCTT GTACTCCTACAGGGTACTCTCATAGTGTTGAGTCATGGAAGTTCTCTCATGGCTCACTGAGCAATAAAAGGCAATTTAAGTCCACTGTTCAAACAAGGGG AAACTTTTCCGAGTGCAGGTCTGCAGCATTGATGCTACTGCAAAAAGGAAAAGGTGAAATTTACTTTGACGGAAAAATGTTCCTATCATCGTTGTGACAT AGGATCAACTTTCATACCTAAGCTTCAAGGGAAAATTTTGGCGACTGAAAATTTCTTTTACACTTCAAAGTTTTTTGGATTAGAACCAAGGGCATATCTG TCTAAGTTGATGAGTGCTGGGCAAGAATTCTGTGGAGATGATTGGTTAAGGCTGAAGGAAAAATACCACTCCCATGATGAGGAAGAGTTGCTTCAGTATT GCTTCTCTTCAGCATACATTGTTGCTCTGCTTCATGACGGTCTTGGAATTGCATTGGATGATGAGAGGGTCAAAGTTGCTAATCAAGTTGGAAATATTCC ACTTGATTGGGCATTGGGAGCTTTTATTCTTCAAACCACGGCTGCTGCAGATGCACAGAACCATGGCTGGATTACTACCATTTTCAGTGATGAATCACCT ACTCTTGTCAGACTTATTGGTATTCTTACAATATTGCTGTTCACAGCTTGGTCTATATCTAAGTGGAGGAAACCACAGTTGAAGACAATTTATGATCTAG AAAAAGGACGATACATAGTTACACGAGTTGTTAGATAATAGTTGCAGTAGATCGGATGTTCTTGTTTTGCAGATTTGGAGGAACTGTTGTGGTTATGATG AAAATAGTTACCCATTCTCACTTGGTGACCATGTCATATTGTGAGGCCATTATAGTGTGGCTCAGATTGTTCATCATTGGATTTGGATGCGGCATGTGGA GTTACCTCTTGGGAAGGAGTAGTTTTGTGTGTAGTGGAATCCAGGAACTGGGTGTTATGCCATTCACTTCACTGGTTATATAAAACAACAGTAGGTGAAG GAGTTTAGGGGGATACTGGATGCTGCATCATTCAACACAAATACCCTGTTATGATCTTTGTACCAAACTCAGCATAAAAGTTACAGAACTGATGTTTGTC AATTGGCACATGCAAAGAAAAAGCTTTCTACATTACTTGTCCTGAGAAGGTAATTTTGCAGAAGCTGATCTTGAAGAATTTGGAACTTATCATAAATATT GAAGTCAATTGGTTGTATGAATACGTGTTAGGCGTATGTTCAATTCAAAGTTATTGTACTTGTGTTCAAAATCTAATGATTAGTATATAAAGACCATCCC AACTGTGGAAAAAAGGTTGTTAATGGCGCATTGTTTATATTTCAACAGCTTAAGCAGTTAGACCCAAACTTTACTTCAATTATGCAATTTTACTATTTGT CCTTAAGGTTAAATGAACTCTGCAAACATGCAATTTTCTAAAGTCCTGTAGTATTTATTCCACTCCTAATACATGCAATTTTCTTTTAGAAAAAA
• Tissue: pods
• Gene name: LI_gene_163435;
• Additional information: details;

Expression of Ll_transcript_419684

FPKM

• PAB: 1.9
• PNAB: 0.4
• PS1: 0.8
• PS2: 1.6
• PS3: 0.5
• PW1: 0.6
• PW2: 1.7
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419684

• Blastp: Probable apyrase 6 from Arabidopsis with 51.75% of identity
• Blastx: Probable apyrase 4 from Arabidopsis with 47.58% of identity
• Eggnog: Ectonucleoside triphosphate diphosphohydrolase(COG5371)
• Kegg: Link to kegg annotations (AT2G02970)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461395.1)
• Pfam: GDA1/CD39 (nucleoside phosphatase) family (PF01150.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;