Ll_transcript_419218

• Id Trinity: TRINITY_DN48716_c1_g3_i1
• Name Transcript: Ll_transcript_419218
• Sequence: CAGAAAAGAGAGAAAACACAAGGAAGCACAAGCAGTTCTAGCTGCTGCAACTGCTGCTGCTGCATCTCCTAGGGTTTCTTCACTCCGGAAAGACTCTTTA TCTGAATGTGTGCAACAGGAGAGTATGATAAAGTTGGATACATTAAGTCGGAGGGATGGCGTTTGTTCTCAGCCTTTGCCATGTGCCAAAGATACACTTC CAAGACTTGCTGTAACCAGGATTTCATCAGAGAAATATTCAGATTTTGGCTTGACATCTTCAAATCTTTCTATTGAACATCCTAGATTATGTGATATATG CAGACGTCCTGAGACAGTGTCCAGACCTATCCTACTTTGCTCTGGTTGCAAGGTTCCAGTTCACTTGGATTGCTATAGTGGCGTGAAAGAAACTACACGT CCCTGGTACTGTGAATTATGTGAAGATTTATCGTCTAGAACCTCTGGGGCATCTGCTATAAATTTTGCTGAGAAGCCTTATTTTATTGCTAAGTGTGCTC TCTGTGGTGATACCCATGGTGCTTTTAGGAAGTCTTCTGATGGCCAATGGGTTCACGCCTTCTGCGCTGAGTGGGTTTTTGAGTCGACATTCAAAAGAGG ACAGGCAAATGCTGTTGATGGGATGGAGACTGTATTGAAGGGAGTTGATCTTTGTTGCATTTGCCGCCACAAGCATGGTGTATGCATTAAGTGTAACTTT GGCAATTGTCAGACCAAGTTCCATCCATCCTGTGCTAGAAGTGCTGGTTTGTACATGAATTTGAGCAGTGCACCTAGCAAGCCACATCAC
• Tissue: pods
• Gene name: LI_gene_163466;
• Additional information: details;

Expression of Ll_transcript_419218

FPKM

• PAB: 1.8
• PNAB: 11.7
• PS1: 10.1
• PS2: 6
• PS3: 9.7
• PW1: 6.4
• PW2: 6.8
• PW3: 5.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419218

• Blastp: Peregrin from Homo with 30.74% of identity
• Blastx: Peregrin from Mus with 30.74% of identity
• Eggnog: phd finger(COG5141)
• Kegg: Link to kegg annotations (7862)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430738.1)
• Pfam: PHD-finger (PF00628.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;