Ll_transcript_421327

• Id Trinity: TRINITY_DN48718_c1_g1_i10
• Name Transcript: Ll_transcript_421327
• Sequence: TATAACTCTACCACCCTGTGTTCCCTCCCATTTTCCTCTTCTCTTCTCTGCTCCTTACCCCTCTACCTCACCTTCGCTTTTTCCTTATACTCTCTCTCTT CTCAATGAACTAATACATCTACCTTAATTTCTCTTCTCTTCTTTTATATGGCGTACAACAACCATAATCTCCACCTCTCTCAAAACCTCCCACTTCACCA TTTCACAGAGCCACAACAACAACAACAACAACAACATCATCAACTTGCTTCAACCTCAGACCTCACCACTAAAACTGTCTCTGATCCTAACCAACCCCTT CAAACAGCACCTAATTGGCTCAACAACGCGCTTCTTCGTACTCAATACAACAACACTAACAACACCACCACCAACAACATTAACAACAGTTCTGATTTTC TGAACCTCCACACTACCCCAGCCTCGGACTCCTCTACCCAATGGCTCTCCCGCTCAATCCTCCACCGCAACCACAGCGAAGTCATCGACGACGTCACTGC CGGAGAATCCATCATCGCCGGCGCCACGCTCTCCCATGACTCTGCCGAATTGAAGGCTAACACCGGAGCCGGGAAGGAGAGCGAGGCGGTGGAGGAAGGT GGTGGCGGAGACGGATTGGTGAACTGGGAGAATGGAAAGTACAAGGCGGAGATTCTAGCTCACCCGCTGTACGAACAGCTTCTGTCGGCACACGTGTCGT GCTTGAGGATCGCCACGCCGGTGGACCAGTTGCCAAGGATCGATGCTCAGCTTGCTCAGTCACAGAATATCGTCGCTAAGTACTCCACTTTTGGACATAT GCTTGGTCATGATAACAAGGAACTTGATCAGTTTTTGTCACACTATGTTCTGTTGCTCTGTTCCTTCAAAGAACAACTCCAACAACATGTTCGGGTCCAT GCAATGGAAGCAGTCATGGCTTGTTGGGAGATTGAGCAATCCTTACAAAGTTTAACAGGAGTTTCACCCGGGGAAGGTACAGGAGCAACAATGTCGGACG ACGAAGATAACCAAGTCGATAGTGATGCTGACCTGTTTGATGGTGGTTTGGATGGTCATGATAGCATGGGATTTGGCCCTCTTATTCCAACAGAGAATGA GAGGTCCCTCATGGAACGTGTAAGGCATGAATTAAAGCATGAATTGAAACAGGGTTATAAAGAGAAAATTGTGGACATAAGAGAGGAAATTTTACGCAAA AGACGAGCGGGGAAACTTCCTGGTGACACTACCTCTGTCCTTAAAGCTTGGTGGCAGTCACATTCCAAGTGGCCTTACCCTACAGAGGAAGATAAAGCAA GGTTGGTGCAGGAAACGGGTTTGCAACTGAAGCAAATTAATAACTGGTTCATAAATCAGAGAAAGAGGAACTGGCATAGCAATCCTTCAACTTCTACTGT CTTGAAGAACAAGCGCAAAAGGTATTGATATCAAAATAATTCCTTTATTTCAACTTAAACTTGTATGACCTTTTCACCAATCTAAATTTAAAAAAGAAGT AATGCAGGTGATAGCAGTGCTGATCATTACATTTAAATGGAGAACTCAAGGACCATTTATATTACTTATTTCTCCGCAGTCAATCATGCTACATGGCAAG GGGTTCAAGAAAAGGCAATGATAACAAAATCACATTTTGATTTTGCTCAAGATATATACAGGGTTAATACAAATGAGGAGCTAATATTGATGCATGTGTT GTGTTACTGTTACCTATACTTGAAGGCCTACCGTAGTTGTGAGGATACAAAATTAGACAGTTAAATTAGGAATTATATACTGAAACCAAATTGGTAAACT CCATGGACGTATTTTTATTCACATTTCAATGCTTTAGATATATAATATATGTGTGTGTGTGTGAATTTTTCCTTCTGTCATACTAATTTTGTCTTTGTTC CTAAATTTTGTATTCTGTTATAGAAATTATATATAGTAAGGTTGGGTATGGTTTCTATA
• Tissue: pods
• Gene name: LI_gene_163473;
• Additional information: details;

Expression of Ll_transcript_421327

FPKM

• PAB: 3.5
• PNAB: 0.8
• PS1: 2.1
• PS2: 1
• PS3: 1.3
• PW1: 1.6
• PW2: 0.5
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_421327

• Blastp: Homeobox protein knotted-1-like 3 from Malus with 72.83% of identity
• Blastx: Homeobox protein knotted-1-like 3 from Malus with 72.6% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001697)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415060.1)
• Pfam: KNOX1 domain (PF03790.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;