Ll_transcript_419729

• Id Trinity: TRINITY_DN48719_c0_g1_i10
• Name Transcript: Ll_transcript_419729
• Sequence: CCTGACACGAAGCAGTGAGTGTTAGAAATGAAGTATAAGTTGAGATGAAAAAGAGAGAGTAGTTTGAAAAAAGCGTAAAAAGGAAGCAAAGAAATATTAA TGGGAATGGCGAATGCAAATGGAAATCGATGGAGGGACCTTGACAAGCTTCTTCTAAGGCATGGCAATCTTGTGGGTCCCAGATTCGAACCAGGACCCGA ATTCCGAGACGATCTTCAAACCTACGCTACCGTTCTTGTTGTTGGAGCTGGTGGTTTAGGATGCGAATTGCTCAAAGATTTAGCCCTCTCTGGTTTTCGT AACCTTCATGTTATTGACATGGATCGTATTGAAGTTACTAATCTCAATCGCCAATTCCTATTCAGAGTTGAAGATGTTGGAAAACCCAAGGCTGAGGTTG CTGCGAAGCGCGTGATGGAAAGAATTAGTGGTTTGAATATTGTGCCACATTTTTGCAGGATTGAGGACAAGGAAATTGATTTCTATAATGATTTTAACAT TATTGCTCTTGGTCTTGATTCTCTTGAGGCACGTTCATATATCAACAATGTTGCTTGTAGTTTTCTAGAATATGACTCTGATGACAATCCACGGGAAGAA ACAATCAAACCTATGGTAGATGGTGGGACTGAAGGTTTCAAAGGCCATGCGAGGGTTATCTTGCCAGGGATCACACCATGCTTTGAGTGCACCATATGGC TTTTCCCACCTCAAGTGAAGTTTCCATTGTGCACCCTGGCAGAAACCCCTAGAACGGCTGCCCATTGTATTGAATATGCTCACTTAATTAAATGGAATGA GGTTCATGGGGGAACTGCTTTTGATCCAGATAATCCTGAGCATATGAAATGGGTCTATGATGAGGCAGTCAAGAGGGCTGAGCTTTTTGGCATTCCAGGG GTTACTTACTCATTTACTCAGGGTGTTGTGAAGAACATAATACCTGCTATAGCTTCCACAAATGCAATTATATCAGCTGCATGTGCACTGGAAACATTGA AGATTGCAACAGACTGCAGCAAAATTATGTCAAATTATTTAACGTATAATGGATCAGAAGGCCTCCACACTAAAGTGGCAGAATTTGAAAGGGATAAAGA CTGTCTTGTCTGTGGTCCTGGTGTACTCATTGAACTGGACCCTTCAATCACATTACAGAAGGTTATTTCTGGATTCTTATCTTCTTGATTTTTTCATATT ACTATTTATGAATTTAGTGTATTTCTGTGTTTCAAGTTCTTTTTACATTCTTGAAGTTGTTAGTTGTTACAATGGCCAACCACTCTTTGACATATTGGGA AATGTAATTTTATTTAGTTTTGGCTAAGAAGCACTAACATTGACATGTGAGACTATAGATGGACATCTTAAGTGTCGGTTTAGGATTTGAAGTGTCTTGT CTGACACTGTGGTATGTGTCTGACACTTGCATACTTCTTCATTTGAAGTTTCTATGCATCAAAGGCTTTGCTGGCTACTTATAATTAAAATCCATCCTGA CTTTGAAAGTGAGCCTTTTGCTGATACCCTTTCAAAGGTTTCACTATTTATAATTAGTGAAAAGAGACAGAGCCATACCCTCCATTTTCTGACAGATGCC TTTTTTTGATATTGGTATGAACCTTGGGAGAACCACACCACAAATGCTAGCCATTGTGGTCGCAGTGCACAAGGTGCCAAGGTCATATAAACTCCATACT GGAATCTCATGCTTCTGATGTGGGATTTAAGTATCAATCCTTACAATTGGATCCTAAATTCTTAACATATATATTCACTTTTTAGTAAGTGGCTTTGATT TTGATTGCTGTTTTTACTTTTTAACTGAATGCAAGCAAGTCATATTTCAATGCATACTTCCCTTCAGTTGTTTTTTTAATAAAACTGTTGGAACAGTTCA TGGATCTTCTGGAAGAGCATCCTAAGTTGCGGTTGTCAAAAGCGAGCATTACGCACAGAGGAAAGAATCTGTACATGCAAGCCCC
• Tissue: pods
• Gene name: LI_gene_163477;
• Additional information: details;

Expression of Ll_transcript_419729

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.1
• PS3: 0.3
• PW1: 0.2
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419729

• Blastp: NEDD8-activating enzyme E1 catalytic subunit from Arabidopsis with 82.18% of identity
• Blastx: NEDD8-activating enzyme E1 catalytic subunit from Arabidopsis with 82.18% of identity
• Eggnog: small protein activating enzyme activity(COG0476)
• Kegg: Link to kegg annotations (AT5G19180)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418855.1)
• Pfam: ThiF family (PF00899.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;