Id Trinity | TRINITY_DN48719_c0_g1_i5 |
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Name Transcript | Ll_transcript_419724 |
Sequence | CCTGACACGAAGCAGTGAGTGTTAGAAATGAAGTATAAGTTGAGATGAAAAAGAGAGAGTAGTTTGAAAAAAGCGTAAAAAGGAAGCAAAGAAATATTAA TGGGAATGGCGAATGCAAATGGAAATCGATGGAGGGACCTTGACAAGCTTCTTCTAAGGCATGGCAATCTTGTGGGTCCCAGATTCGAACCAGGACCCGA ATTCCGAGACGATCTTCAAACCTACGCTACCGTTCTTGTTGTTGGAGCTGGTGGTTTAGGATGCGAATTGCTCAAAGATTTAGCCCTCTCTGGTTTTCGT AACCTTCATGTTATTGACATGGATCGTATTGAAGTTACTAATCTCAATCGCCAATTCCTATTCAGAGTTGAAGATGTTGGAAAACCCAAGGCTGAGGTTG CTGCGAAGCGCGTGATGGAAAGAATTAGTGGTTTGAATATTGTGCCACATTTTTGCAGGATTGAGGACAAGGAAATTGATTTCTATAATGATTTTAACAT TATTGCTCTTGGTCTTGATTCTCTTGAGGCACGTTCATATATCAACAATGTTGCTTGTAGTTTTCTAGGTTTGTTTTCTTTCTCATCTTTAACTTTTACT GCTAATGTTGCTACATGTGTTATAGGGATGACAATGAAAACTGAACTCGTGAGTATCTATACGAATCTAACGCAAAGTTAACTGGGAAAATCCGATGTGA CTGGGTTCGAGTTTTACCGGAGTTCAATGTCTGGGTTTGAATGTGTAAAATTTCAAAATTGTAACTCCGTGTGATTGTGAAGAAAGAATACTTCCCTAGT AGACTGTAGCATCATGAATCATACAGGTTTCACGTGGTTCCTATCAGGTTTGGGTTACCCGAAACCTAATTGGGTTGGGGATGATAGTAATGTTTTCAAC CCCATTGAATTCGGGTTAGGAATTTCGGGGCTGGGTAAGCATAAACCTGGCCCCGATCCGCCCTGTTGCCATTCCTAATGTGTTGTAGTGAGAAACTTTG AGGAATGTATCACCTGATGATCATTAGTTATCACTGCACCGAGAAACTGATTGGCAAAACTCATGTAACTAATCTAATTGATTCATTAGGATAAATATCT TGCTGATTAGAGGAACCAGTAATCATTTAACTGACTAGGGTCTAACTTAATTAACTACCTGTGGTAATCCTTTGTTTTTTAGCTTTTTTTTATTCGTGGA CTGTGATTACTTAATACTCTGTAAAACTATCGATAGATCAAGAAATTTTGTTCTATAAGAATCAGACCAGGTGGAAACTAAATCTAACTCAATGGTGAGA TTAGCAAGAATCTTTCTTATGTATGGAAGTCACATCAGACAAATACACACACACAGATATGTGTGTTCAATTTAAGTCTGCAACCTTTTTAATATCGTTC ATTATATTGTGCCAACATAACTTTTCCCTTCCTTTATTAAAAGAATCATGTCTCTTGGTATTGGAACCTAACATGCCATGCTGTATAAGGCCATTCATTT CTTGGTGTCATATCTGACCTCAACTATGTAAAATTCCAACCTTTCCCACTCACCTCCCCCAAATTTTACTGCTAATTGCTTATGCTAATTTTTGTTTTCT TTTTTCCTCCCTGGTAAATTAGAATATGATTCTGATGACAATCCACGGGAAGAAACAATCAAACCTATGGTAGATGGTGGAACTGAAGGTTTCAAAGGCC ATGCCAGGGTTATCTTGCCAGGGATTACACCATGCTTTGAGTGCACTATATGGCTTTTCCCGCCTCAAGTGAAGTTTCCTTTGTGCACCCTGGCAGAAAC CCCTAGAACGGCTGCCCATTGTATTGAATATGCTCACTTAATTAAATGGAATGAGGTTCATGGGGGAATTGTTTTTGATCCAGATAATCCTGAGCATATG AAATGGGTCTATGATGAGGCAGTCAAGAGGGCTGAGCTTTTTGGCATTCCAGGGGTTACTTATTCGTTTACTCAGGGTGTTGTGAAGAACATAATACCTG CTATAGCTTCCACAAATGCAATTATATCAGCTGCATGTGCACTGGAAACATTGAAGATTGCAACAGAGTGCAGCAAAACTATGTCGAACTATTTAACATA TAATGGATCAGAAGGCCTCCATACTAAAGTGTCAGAGTTTGAAAGGGATAAAGACTGTCTTGTATGTGGTCCTGGTGTACTTGTTGAACTGGACCCTTTA ATCACATTGCAGAAGGTTATCTCTGGATTCCTATCTTCCTGTTTTCTCCATATTACTAATTAGGGATGCAGTGAATTTCTGTGTTTGAAGTTCTTTTTAC ATTCTTGAAGTGTAATTTTATTTAGTTTTGGATAAGAAGCATGAATGTTGATTGACATTTGACACTATACATGGACAAGGACACAGACACCACAAATCTT AAGTGTCCCATTATGATGTGAAGTGTCCTGTCTGACATGGTGATGTGTCTGACACATCTCATTTCGTATGCTTCAAAAGTTTTGCTGCTAGCTGCATACG ATTAAAAATTATACTGACCTTAAAAATGACCCTTGCTGTTACTCCATCAAAGGTTTCACTATTTATAATTAGTGAAAAAGAGTCGCATCCTCCTTTTCTT ACATGTCTGTCCCTTTTATTTAACACATGACTCATTTTATGTTAGTGTTAGAAATAGCGTATGTGCATATCAAAACTTGATAGACATTAATATTAGGATT TTGGACATGTGATATCTTGGTTATAAAGCAGCAACCTTACCGTTGTGTTGAAGTTTGCCTTCTTTCCAAATCATTATTGTTAGATAGGAAAATATTTTGT GTCACCATTCAAGCCGTTTTCAAATTGAGGATAAATCAATGAAATTAGTACTATATATGGGATGTGTTAATGATATTTATATGAACCTTGGGAGAACCAC ACCACATAGGCTAAATTTTGTGGTTGGAGAGCACAAGGTGATGCCAGTGTGGGGGCTGGGGAGCTATTGGCACTCCAAATTGCCCATCCACACTTCCTTC TAAACCAATCACATTTTTAGTTTTTTTATTTTACAAAACTATGATCGATAAATGAGGAGTGTAAATAGGCATTTGGGAGTGCCAATAGCATCACCCGTCA TGTAAACCCCACTCCGGGATCCCATTCTTCCAATGTGAGACTTAATTCTCCTAACAGATACATTCACCTTTTAGTAAGTAACTTTGATTTTGTTTGTTGT TTTTTTACTTTTTAGTTGAATTTAAGCAAGTCATATCTTGATGCATATTTTTCTTCTAATGTTTTTTAATCAAACATTGGGAACAGTTCATGGATCTTCT TGAAGAGCATCCTAAGCTGCGGTTGTCAAAAGCGAGCATTACGCACAGAGGAAAGAATCTGTACATGCAAGCCCCCCCTGTATTGGAAGAAATGACTCGA TCAAACCTGGTTCTACCACTTTTTGACCTAATGGGTAAACTGTCCAAGGACATAATCCATGTGAATGGTATGACAAGCAAGAATGACGAAAAAGTCTCCT GTCTGAGAAAATTACGTGTTGTTTTCAAGGGAGTCGACGAGGTCACTGATATGGATACAGCTGGAGGAGCATAATTTGGGATATCCAAATATATGCTTGA AACTTTTAGGATCTTTCAAGCACAATCACAATTATTTAGTCAGTGTCTGTGGTCACATCTAATTGGAATTGGTAAGGCATGGTTCACTCATACTCGCCCT GTAAAACTTATTCATTTGATTGCTGGCTAGTCGATACGAATTTGATGCAGTGGTTTTCATTTGTTGTTTTAGGGTCATTTTTTATGGCTCTTCCATTTTA TCATATATTATTAGCTTGGTAAGGTGGCAACTTGTTCTGTTTGGGGGATGCTGTGTTTTTTACATGACATTTTATTATTTCTTGAGTTAATCTAGGTGGC TTGGTGAATTGTCATATTATAGGAGTTGAAGTAAGAAAGAAGGGCCATCAGAGAAGTAAATGAATGTTGATAAGCTCTATAAGCTGACCTGAAAAGCTTA AAAAGATGAGGAATAATGTTAACCGTTCAATCTCTCAGAAAAACTGCAAATTGATGATATAGTTGCATCTGCAATTAAGAACTCCCACTTCAACTGTTTT TTAGGTAATTTTGATAGAATTATTTTTCAAAATAGTTGTCTTTTTTAG BLAST |
Tissue | pods |
Gene name | LI_gene_163477; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_419724
Blastp | NEDD8-activating enzyme E1 catalytic subunit from Arabidopsis with 82.26% of identity |
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Blastx | NEDD8-activating enzyme E1 catalytic subunit from Arabidopsis with 81.28% of identity |
Eggnog | small protein activating enzyme activity(COG0476) |
Kegg | Link to kegg annotations (AT5G19180) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430388.1) |
Pfam | ThiF family (PF00899.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |