Ll_transcript_421353

• Id Trinity: TRINITY_DN48726_c0_g1_i1
• Name Transcript: Ll_transcript_421353
• Sequence: AAAATTATAACATTTGAAAATTACGAAAATTCTGAGAAAAATATACAAAAGCTATCCAACTTATCTTATCGGACACGAGTCACACAAAGCAAGTGACACA ACGACACGAAATCGAACCAGGTGAGCGAAACGTTTTCCTTTAAACCTCATCCAATCCCAAAACTCCCATGATCCCATCTCCCTCATCAACTCCTTAGTGG AGGAAGGTTGGTCTTACCTCTTCACTACCCAACCCCACTATCCCCCATTTTTGTCTCCACTTTCTCCCATTCTTTATTTTGTTTCATAACCTCATAATGA ACATTACCAACATGGCAACAACAATGTACCAATCTTGAATTAAAAACCAGAGTTTTCTCTGTACCTTTCTTTCTACACAAACTCTATAATATAAAGGCAC TAAAAGTTATATCTTAAATCGAGAAACTAAAAAAACGGAAATGAGTTCACTGAATCTGAACACATGGGCACGCCCCAGATTCATGTTGAAACAAGCCACC AGATCTAGATCTACGAATTTTCAATTTTTCCATAGCCTCACAAACTTACCCATTTCCTCTTTCACCACCACAAAACAAAAAAGAACACAACTTTCTTCGT TTTCTTCTTCTTTCTCAATCTCCGCGGTGCTAACTAAAGATGACACCCTCAAAGGCGAAGAAGAAAAAGAGAAATCAGCATTCAATTTCCAAACCTACAT GGTTGAGAAAGCGCGCTCGGTGAACAAAGCCTTAGACGACGCCGTTTTATTACGTGAGCCGCAGAAGATCCACGAAGCCATGCGGTACTCGCTCCTCGCC GGCGGCAAGCGCGTGAGGCCGGTCTTATGCGTGGCTGCCTGCGAGCTTGTCGGCGGCAGGGAGTCTATGGCCATGCCAGCGGCGTGCGCCATTGAGATGA TCCACACCATGTCACTCATTCACGATGACCTCCCCTGCATGGACAACGACGACCTCCGCCGTGGGAAGCCTACAAACCACAAGGTTTTCGGCGAGGACGT CGCGGTCCTTGCAGGGGATGCCCTCTTGGCATTTTCCTTCGAACACATCGCCGTTTCCACGGCTGATGTGTCACCAGGGAGAGTCGTCCGCGCAATCGGA GAGCTCGCTAAATCGATCGGCACCGAGGGCCTAGTTGCCGGGCAAGTGGTGGACATTAATTCAGAAGGGTTGTCTGACGTTGGGCTGGAGAGATTGGAAT TTATTCACCTTCATAAAACCGCGGCGCTTCTCGAAGGCGCTGTTGTTCTCGGAGCGATTCTTGGTGGTGGAACCGATGAGGAGGTGGAGAAGTTGAGGAT GTTTGCAAGGTACATAGGATTGATGTTTCAAGTTGTGGATGATATTCTTGATGTTACAAAGTCATCAGAGGAATTGGGGAAAACTGCTGGGAAGGATTTG GTAGCTGATAAGGTTACTTACCCTAAGCTTTTGGGGATTGAGAAATCAAGGGAATTTGCTCAAAAATTGAACAAAGATGCACAAGAACAGCTTTCTGGGT TTGATCCAGATAAGGCTGCTCCTTTGATTGCTTTAGCTAATTACATTGCTTATAGGCAAAATTAGACTCTTTTGTGTAACAATTTGTTGTTTACAAGGAA AAAAAAGTTCTATTTTTGGGTTTACTTATTTACATAGGATCATTGCAATCAGTACTGATGTATCTATACCATGGTTTTAAATTGCTGTTGTTGCGATTAA GATTATCAGCAACTTATGTTTTAAATTGTCACGAGTGGGGCTATTGTGATTGTAGTTATTGCGGTGTGAATTATTGTGATTAAAAAATATATTTGAATTT GATGTGACTCGATGCTGTCCAAATGCGGTCTAATGTAGCTGCATCATTCTGATTTGGTATCACAATACAATTGCAGTGTGATATAGCTGTAGCGGTGACA GGTTTACCTTGTTTCCTAATTTCTTTATCCTTTCCTCAAAATTCCTCCATTGGAGCAAGTTTATGTGCAGTCTTTTTATTAGTCTGCTATTTGATTTTAG AATTATGCAAAGGACATGTACTATCTTTGAGTAGTGAGCATCATTAGAGGTTTCTGAAACTTTAAAGATTCTAAGGAATTGGTCTTACAAATTATGGTGG TGAGATGTATTAATTGGTGGTGG
• Tissue: pods
• Gene name: LI_gene_163518;
• Additional information: details;

Expression of Ll_transcript_421353

FPKM

• PAB: 3.5
• PNAB: 0
• PS1: 3.9
• PS2: 2.2
• PS3: 4.4
• PW1: 0.8
• PW2: 3.6
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_421353

• Blastp: Geranylgeranyl pyrophosphate synthase, chloroplastic from Hevea with 73.54% of identity
• Blastx: Geranylgeranyl pyrophosphate synthase, chloroplastic from Hevea with 73.47% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446770.1)
• Pfam: Polyprenyl synthetase (PF00348.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;