| Id Trinity | TRINITY_DN48726_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_421355 |
| Sequence | AAAATTATAACATTTGAAAATTACGAAAATTCTGAGAAAAATATACAAAAGCTATCCAACTTATCTTATCGGACACGAGTCACACAAAGCAAGTGACACA ACGACACGAAATCGAACCAGGTGAGCGAAACGTTTTCCTTTAAACCTCATCCAATCCCAAAACTCCCATGATCCCATCTCCCTCATCAACTCCTTAGTGG AGGAAGGTTGGTCTTACCTCTTCACTACCCAACCCCACTATCCCCCATTTTTGTCTCCACTTTCTCCCATTCTTTATTTTGTTTCATAACCTCATAATGA ACATTACCAACATGGCAACAACAATGTACCAATCTTGAATTAAAAACCAGAGTTTTCTCTGTACCTTTCTTTCTACACAAACTCTATAATATAAAGGCAC TAAAAGTTATATCTTAAATCGAGAAACTAAAAAAAACGGAAATGAGTTCACTGAATCTGAACACATGGGCACGCCCCAGATTCATGTTGAAACAAGCCAC CAGATCTAGATCTACGAATTTTCAATTTTTCCATAGCCTCACAAACTTACCCATTTCCTCTTTCACCACCACAAAACAAAAAAGAACACAACTTTCTTCG TTTTCTTCTTCTTTCTCAATCTCCGCGGTGCTAACTAAAGATGACACCCTCAAAGGCGAAGAAGAAAAAGAGAAATCAGCATTCAATTTCCAAACCTACA TGGTTGAGAAAGCGCGCTCGGTGAACAAAGCCTTAGACGACGCCGTTTTATTACGTGAGCCGCAGAAGATCCACGAAGCCATGCGGTACTCGCTCCTCGC CGGCGGCAAGCGCGTGAGGCCGGTCTTATGCGTGGCTGCCTGCGAGCTTGTCGGCGGCAGGGAGTCTATGGCCATGCCAGCGGCGTGCGCCATTGAGATG ATCCACACCATGTCACTCATTCACGATGACCTCCCCTGCATGGACAACGACGACCTCCGCCGTGGGAAGCCTACAAACCACAAGGTTTTCGGCGAGGACG TCGCGGTCCTTGCAGGGGATGCCCTCTTGGCATTTTCCTTCGAACACATCGCCGTTTCCACGGCTGATGTGTCACCAGGGAGAGTCGTCCGCGCAATCGG AGAGCTCGCTAAATCGATCGGCACCGAGGGCCTAGTTGCCGGGCAAGTGGTGGACATTAATTCAGAAGGGTTGTCTGACGTTGGGCTGGAGAGATTGGAA TTTATTCACCTTCATAAAACCGCGGCGCTTCTCGAAGGCGCTGTTGTTCTCGGAGCGATTCTTGGTGGTGGAACCGATGAGGAGGTGGAGAAGTTGAGGA TGTTTGCAAGGTACATAGGATTGATGTTTCAAGTTGTGGATGATATTCTTGATGTTACAAAGTCATCAGAGGAATTGGGGAAAACTGCTGGGAAGGATTT GGTAGCTGATAAGGTTACTTACCCTAAGCTTTTGGGGATTGAGAAATCAAGGGAATTTGCTCAAAAATTGAACAAAGATGCACAAGAACAGCTTTCTGGG TTTGATCCAGATAAGGCTGCTCCTTTGATTGCTTTAGCTAATTACATTGCTTATAGGCAAAACTAGACTATGCTTCTTAACAATTGTTTGTTTAGAGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_163518; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_421355
| Blastp | Geranylgeranyl pyrophosphate synthase, chloroplastic from Hevea with 73.54% of identity |
|---|---|
| Blastx | Geranylgeranyl pyrophosphate synthase, chloroplastic from Hevea with 73.54% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446770.1) |
| Pfam | Polyprenyl synthetase (PF00348.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |