| Id Trinity | TRINITY_DN48727_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_419881 |
| Sequence | TCTAGAACACATATTACTCATATAGTCATATTATAAGTATCAGAGTGCAACTAGGGGGGGTGAATTAGTGGTTTTAAAATATTGACCACTTTTTCTGCAA AATAGAAAGTTAAAGTGCAGCGGAACAATATTCTTCCTTTGTTATTATCGCCATATGTGACGTATCCTTTGTCCCTTGGAGTCAGGACAGAGAATTTGCT TTTGTCGCCCGTCATGTGTTTTAAGAAGCCGCTATCCAGATACCATAAGTTGATGGTGGCTCTCAAATTTTCCTCTTCATCATCAGAATGATGAGATTCC ATAAGCGATAGATGTGCTTGTTCTTCGTTTTCTACTTCAGATGCAGAATTAGTATCATTATCTTCCCAAGCAATGTATGCCCTTCGTCTAGTCTTCATAT CGTTCTTTCCTTTGAAAGAACCCTTCTTTAAATTTGGACAGTCCATCTTCATGTGACCAGGTTTGCCACATTCAAAACATGTAAAGTTCTGATTTGAGGT GGAGGCACCATTGTTCTTGGTGAACTTCCTTGCTTGACCATTTTTTGCACTTTTGTTCCTTTTAAGGAACTTGCTGAATTTCTTCACGAAGAGACTCATA TATTCTATATCATCTTTTTCTGATTCATCTCCGGATGAGCTATCAACTTTTGCTTTTAGGGAAATGTTCTTCTTCTTCTTCTTCTCTTGCTCCTCATGTT GATTAAGTTTGCTAAGTTCTAGTACATGTTCCTGCAGTTTGGCAAACTAAGCAGCCAAAGGCATTTTGGATAAACTTTTCTTTTCAGATATTGCAGTTAC CTTTGGTTGCCATATTTTGGTGAGTGATATTAAAACTTCAAGTTTAAGTCACTATTTGATAGAACTTTGCCAAGTGCAAGAAGGTGAGTGGTAAGATGAA TGAACCTCTTTTTTAGATCAAGAAATTTCTCTCCAGGCTTCATACGAAACATTTCATACTCCTGGGAAAGAGTGTTGAGTCTTGACCTTTTTACTTCCTC TATTCCTTCGTGTGTTGTCTCTAGAGTATCCCACATTTCCTTTGCAGACTTACAGTTAGATAATCTAAATAATTCATCAATGCCAAGTCAGAGGTGGGGA TGTTCTTTGCTTTCAGATCATATTGCACCTTCTTCTTGTCCTCATCATTCCATGAAGTTTTTGGCTTTATTTACCTTATATTGTTGACAACAGTAAATGG TACATATTATCCTTCTTCGATGGCATTCCCTATATCCAAGTCTTGAGATTCAATAAAAATCCCCATTCTGATTTTCTAGAAATCGTAGCACACTCCAACA AAGCTTGGAGGGCGGTTGATGTTGGAACCTTCTCCTAGGAAAGATCTTGAGGCCACCTCTGTTAGGATCAGACTTGAGAGTATTTTACTCAAATATAGCT CGGGTGGCAATTGTAAGTATCAGAGTGCAACTAAGAGGGGGAGTGAATTAGTTGTCTTAAAATAATGGTCAGTTTTTATACAAAATCAAGAGTTAAAGTG CAGCGGAAAAATTTGCAGAAAAATTAAACGAAATAAAATGAAAGAGATAAGGGAGAAGAGAATACACATAGATTTTATACTAGTTCACCTTCTTGTCCAC CGAATGCTACATCTAGTACTCTTGCAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_163531; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_419881
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 26.76% of identity |
|---|---|
| Blastx | - |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_007161812.1) |
| Pfam | Zinc knuckle (PF13917.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |