Ll_transcript_420033

• Id Trinity: TRINITY_DN48729_c0_g1_i1
• Name Transcript: Ll_transcript_420033
• Sequence: AGGTTCCTTTGTGCAGGTATGTTACTCTATTCATTATTATATCTAGATTGGATATCTATATTGTTCTTTGGTGGTTCTATATATCTCTTCTCATTGTGGT TGAGCATGGCTTAGTAGTGGTCCCTGTTACTGTTGTTTATGCTGTAGGACACAGGGATGATGGTCACGACTCCTTTTCTTGTGATCTAGTTTTAAGGTTG TACTTACTATGTTGTTTATCCTCATAATTCTAATAACTTAATAAGTGTCATGGTTTGTATTGTCCATTTTCTATGCATCATTTTACCGTGGTTAATGGTT TGTTAGTTTGTATATTAACGGGTGCCAGGTGGTTTATCTTTTGCAGGCTGGTGATTTTGCCAATCAAAATGGTATGTGTTTTATTGATTTTATTGACACA TTGCCTCCTATTATGAGTTACCTATCCCTTTTTAAAGGTTGCAATTTGGTAAAATATATGTAGTCACATTCTTTGTGTTTTTATCATTTGATCATTCAGT TGTCCGAGTTGCAAGCCTTGTTCCATTTGCATGTTCCTTATGACAATGGTAACTTCCTTTCTAAGTCAATTTGGGGAACATAATTTAAAAAAATTATGCA TGAAAAACCTGTCACTGAGTGAGCTAATGAACATATTATAATTTGTAATTTTGGGTTTGTTTTGTGATATTGCGTATGTTGAAATTGATATGTATGTGTG TATATGCAAAATTTTAATCCACCTGAATTATTGGGTGCTTTTATCCCTTTGAAGAATTGACATTATACCTTATTGTATTGTAGTTGGTAAATTTTAGCAA CCCATTGCCACTTCCTAAATATGCCCCTGATCATTAGTAGGAGTTTATATAGTTTGAACCATTGAAGCACTTTCTTCATAAATATCCTTGAAACACTCAT TTCTTACCCTCTGGCTCCATGTTGATCATCATGTAATCCATGCATCATATTTTTGTATGTTTTGTAGGGACTAGTGGAGAAAGCATATATGGCTCAGATT TCTCAGATGAGTCTTCTAGGCTAAAACATGATGCTCCAGGCCTTCTATCCATGGCAATTTCTGACCGTGATACTCTTGGTTCGCATTTTATTATCACTTT GAAAGCTGATCATCATCTTGATAGGTTTGTGTATCTAATTTATTCTTGGTGGCCATTTATTCATTATATGTTCTATTTTTATCGTGGGGTCATGAAAGGT ACATTGCTCGATTGCACAGTAGTTGGTTCTGAGTGTCATTAAATATGTATTTTGTTTATCTTATTCAATTGAGGAGCCATTTTACAGGAAGAATGTGGTC TTTGGGAAGCTTGTGCTAGGGCATAATATTTTGAATAAAATTGAAGATGTGGGCGATGAAGAAGGGCGTCCAACTGTAACTGTTAAAATCGCTAATTGTG GTGAATATGCTGAGGCACGGCATAAGGGAAAGCACAAAAAGTCTTCAAAAGACAGAAGGAAAAGGAGAAGAAGATACTACTTATCTGAATCAGAGAGTTC TCCAGATTCAGACACAGAGTCTTCAGAAACTAATAGTGATTCTGAGTCAGATGTGTCATCATCATCTGACATAAGTTCTTCAAGTGATGACAGGCGAAGG AAGAGAAAGAGATCTAGAAAAGATAAACATAGACATGGAAAAAGAAGGAATAAACGCCGCGACAAGAGGCAAAGGAGACGGGATAAGAGATCAAAGCGTA GATCAAGAAGGGAACCAGGCAGTGATTCAGATGGTGAGAGTAACCGAGACGTTAGCTTTGATGGTGCAACTCTTGATGATCAAGGGAAAGGGCAGAACCA TAAAGATCATTCTCAGAAAAATGGAGCTAAAGTTCGGTCTCCCTTAGTTGTGAGAGACAGTCATAACAAGGACAGGGCAGTGGATATGCCAGAGACTGAA GAAGAACTTCCAAAGCTAAATGGAAAATGGCTTACTAATGGCATTGGAGCTGAGTATAGATCTGACCGAAGTGAAGAGAGGCAGCCCGACGTGATGGATT ATCATTCAGGAAAATCTAGGAGTCGAAGCATGAGTCCTATGCGACCCATGAGTAATAGTTTGAGTATCAGTGCTCAGAGGAGTCAGATCAAGAGCCCGAG TGTAACTCCAAAAGAGAGATTTAACAGAGGTCCAACTGGTAGCAGAAGCCCTCCAGCACGAAGGAGTGTGAGCAGAAGTCCTGTTAGAAGCATCAGCAGA ATTCCATGCGAAAGCATCAGTAGAAGCCCAGTAAGGGGCAGGAAGAGAAGAAGTTTGAGCAGAAGCCCAGCAAGGGGTGGAAAGGGGAGAAGTGTCAGTA GAAGCCCAGTGAGGGGTGGGAAGGATAGAAGTGTCAGTAGAAGTCCTGTGAGGAGTAGGAAGGGGAGAAGTATTAGTAGAAGCCCTGTGAGAAGTCGTTC TTTAAGAAGCATCAGCAAGAGCCCTATAAGGTTCTCCTCTCGAAGTCGCAGGAGTTCTCCCAGAGCATCATCACGAAAAACTATCAGCAGAAGTCCAGTT AGAGTATCAAGAAAGGGTGTTAGCAGGAGTCCAGTTAGATCACCTTCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCCTTCGAGGAGAGGCATTAGCC GAAGTCCTGCCAGAGCACCAAGCAGGAGCAATCGCCGAAGTTACTCTAGGAGTCCTAGTCCTGTTCGTAGGACAAGGACACCTCGTGGGAGGAGTGTGTC GAGGAGTGTTTCACCTGCTGTCAGAAGGGGAAGAGTTTTTAGTGAACGATACTCTTATGCACGAAGGTATAATACTCCCTCGTGGTCTCCTGTGAGGTCA TACCGCTACAACGGAAGAGATCGTGACAGATATTCTAGTTACAGAAGGTATTCCCCTAGGCGTTACAGGAGCCCACCACCACGTGCAAGAACTCCTCCAA GGTACCGAAGCAGGAGGACACCATCTGTTTCCCCCAGCCCACGCTACCGTGCTAGACGCTATAGCCGAAGCCGTAGCCCGGTCAGCAGCCGTTCCCCAAT TGAGCCACATCGATCTCACCCCTCTTCTCGTGTGGATAGACGATTATCATCTTCTCGGAGCAAGAGTCCGTCAAAGTCCAGGTCTTCCATGGAATCACAA TCTCCACGAAAAGCAAGCAGAGACAAGAGGTCAGGGTTATCCTCCTCTAGAAGCCCAGATGGAAAGAAAGGCCTGGTCTCTTATGGAGATGGTTCTCCCT ACTCGGGGTAAAGGTGAAATTTGTGGCCTGAGGGCCTTGGCATACTATCCTTCCTTTTTATGAGTTGGACTCGCCAATTCTTGAACTCATGCTTTTACTT GTTTGCTATAAATTCTCGATGATACTTATTCCCTTTTATAGACCGCTATTGCATGTTGAAAGATTCTACTACTAGAGTTAGAACAGGATTCAATTTTAGG TGTGGATTTATTGCGATATTTGTTGGATTCCAACGAATTTGAATGTTAGTACCCTAGTTGTTTGTCAGTTAAGGTATCCGAGTCGAAATTATAATTTTTT GTAGGCGTTTCGGAATGTTGCCCCCTCCCCCTTCCCCCTCCGGCCGGAGGGAGCCTTCAGATTTCTAGTTTATGATTGAACTGAATTGATCCCGTTACTT CCCTATGCCTGTTCCCTGCCAAGCGGAATGGACAAATGCATGCATTAAACTGTGCTGGAAACCTGAAGGGTTAATATTTCAAGGAAGACATGTTTTTAAA CATTATGAATAAGTCACTTGCTTGTTATGTGGG
• Tissue: pods
• Gene name: LI_gene_163548;
• Additional information: details;

Expression of Ll_transcript_420033

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 0
• PS2: 0
• PS3: 0.7
• PW1: 0
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420033

• Blastp: Peptidyl-prolyl cis-trans isomerase CYP95 from Arabidopsis with 49.08% of identity
• Blastx: Peptidyl-prolyl cis-trans isomerase CYP95 from Arabidopsis with 56.9% of identity
• Eggnog: peptidyl-prolyl cis-trans isomerase activity(COG0652)
• Kegg: Link to kegg annotations (AT4G32420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416706.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;