Ll_transcript_420056

• Id Trinity: TRINITY_DN48729_c0_g1_i14
• Name Transcript: Ll_transcript_420056
• Sequence: TGCATTTACAAACCCTAACTCATAATCACTTTCACACTCTTTTTCTGCCTCTGCGTTTTTCAGGTAAGTGGTGATGGCAAAGAAGGAGACTCCCCTGGTG TTTATGGATGTGTCCGTAGATGGGAGTCCTGTTGAAAGGATGGTTTTTGAGCTTTTCTATGACATCGCTCCAAAGACTGCAGAAAACTTCCGTGCACTAT GCACAGGAGAAAAGGGAGTCAGTCCAAACACTGGAAAACCGCTGCACTACAAGGGTTCTTTCTTCCATCACATTGTAAAAGGGTCCATTGTGCAGGGTGG TGATTTTGTCAATCGAAACGGTATGGTATCCTGTTGATAGATTACCTCTAATTATAATTTTTTCTCTCCAATTTTGAAGGTTGAGATTTGATACAACATA TGCTGTCACTTTCTTTATGCTTTATCATTTGATAATTCAGTTGTCCAAATTGCAAGCCTTGTTCCATTTTCATGTTTCCTTTGACAATGGCAATTTAATT TCCTTTCTAAGTAGGAATCTATCTAACAAAGTTCCCTTTAATCAAACACAGATTGGCCTGTCATTGAGTGGAGTATGAGAGCAGTTTGATTTTATCATTT GGTTAATTTCTTGATATGGCTATACTGTGGTGTACTAGTAGTGATTTCAAAGTTATAGTCATTCTATCTTTTTGTTTTTATCTGTTTGCCAACTTTTTCC ATCTTTCTTATTCCATTTTTTTCAATGCTTATTTGTTTAAAACCATGTCACCTGTGATGAAACCTCTTAAGCCTCGTTGACATTAATCCCATATCTTTTC TGTTGGCATCCCAAATGTATTATACATTTCACTATACTCCTATATTACATTTTCTGGGTGTTTGGCAGGGACTGGTGGAGAAAGCATATATGGTTCTAAG TTCCCAGATGAGTCACCTAGGCTAAAACATGACGCTACAGGCCTTTTATCCATGCCAGTTGCTAATCGTGACATTCTTGGTTCTCATTTTATCATCACTT TGAAAGCTGAGCAGAATCTTGATAGGAAGAATGTAGTCTTTGGCAAGCTTGTGCAAGGTCTTAATTTATTGAAGAAAATTGAAGATGTAGGTGATGAAGA AGGACATCCAACCGTAACTGTTAAAATAATTAATTGCGGTGAATATACCGAGGATGGGAAAAAGGTAAATAAATCAAAAATAGGAAAGCATGGATCCTCT GGAGCTAATAGTCTTGAAGCTCGACGGAAGGGAAAGCAGAAAAAATCTTCAAGAGACAGAAGGAAAAAGAGAAAATACTACTCTTCTGAATCGGAGAGTT CATCAGATTCAGATACAGTATCTTCAGAAAGTGATAGTGATTCTGATTCAGACTCATCTTCATCATCTTACACAAGTTCATCTGGGGCTGACAAGCGAAG GAAGAGAAAGAGATCTAGGAAAGATAAACATAGACATGGAAAAAGAAGAGATAAACGCCGAGACAAAAGGCGAAGGAAACATGATAAGAAATCAAAGCGT ATATCAAAAAGGGAAACAGGTAGTCTTATTGATTCAGATGGTGGAAGTAAGGGTGACAATAGCTCTGATAGCAAAAGTCTCAATGCTCAATTGAAAGATC AGAAGAATAAGGATCAATCTCCTAAAAATGCTGAATTTCAGTCTCCGTTAGTTGTGGAAAAAGAGTTACGTCCCATGCATGATCAAAAAAGAGAGGAAGT GAGTATGCTAGAGAAGGAAGAACTCCCTAAGGAAAATGGAGGCCGGCATAGCAATGGTGCTGCAGCCAACTATAGATCTGACAGAAGTGAAGAGAGACAG CATGACACAATGGATGATCATCCAGACAAATTTAGGAGCCGAAGCACGAGTCCTAAGCGACCCATGAGTAAGAGTATTAGTCCCAGGCATGAGAGCAAGA GCACAAGCATAAGTCCAAGAAGGATGTTGAGCCGAAGTCCAAGTGTTGGTGGTAGAAGTCCCCATGCTCCATCAAGAAGAAGCATGAGCAGGAGTCCTGT TAGAAGCATCAACAGGAGTCATGTCAGAAGCATCAGCAGGAGTCCTGTCAGAAACATCGGCAGGAGCCCAGTGAGGAGCAGGAAGAGGATAAGTGTCAGT AGAAGCCCAGCTATAAGTCATGATCGTAGAAGTGTCAGAAGCCCAGTGAGAACTCGCGATCGTACAAGTTTAAGTAGAAGCCCTGTGAGAACTCGCGATC ATAGAAGTGTCAGCAGGAGCCTTGTAAGATCCCTTTCTCAAAGCCGCCAGAACAGAAGTTCTCCCAGAGCATCATCAAGAAGAATGGTCAGCAGAAGCCC TGTAAGAGAGTCAAGAAATAGTATAAGCAGAAGTCCAGTCAGATCATCTGCCAGAAGCTTAAGCAGAAGCATCAGCCGAAGTCCAGCCAGAGTGCCAGGC AGAAGCAGTCGCCGTAGTTATTCTAGGAGCCGTAGCCCTGTTCGTAGAGTAAGGACACCTAGTAGGAGTGTGTCAAGGAGTGTGTCACCTAATGCTTCAC CAAAGAGGATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAAAACTCCCTCCCGTTCTCCTGTGAGATCGTACCGCTTTAA CGGAAGAGGTGACCGTGACAGATATTCAGGATACAGAAGATACTCCCCCAGGCGTTACAGGAGCCCACCACTACGGAGAAGAACTTCACCAAGGTACCAA AGCAGGAAGAGCAGGACGCCGTCTGTGTCACCCAGCCCACGTTACCGTGCTCAAAGATATAGCCGAAGCCGTAGCCCAGTTCGCAGTCGATCGCCTGTGG AGCCACGTCGACCTCTGTCCAAAAGCAGGAGCCTGTCACGATCTCGATCAAAATCTTCACAGGAAGCACAATCTCCACATAAAGTGATCCGAAATAACAG GTCAAGGTCATCATCTGGAAGCCCAAATGGAAGAAAAGGCCTGGTCTCATATGGAGATGGTTCTCCGGACTCCGGCTAAGGGTGAAATACTTGGTCCAGA GTGTCTAATGAAACAAACCATCACCTTTTAAGGTGAAAATACATTGATCCAGAATGTTCATTTCTTTATAAATCATAGTTGAAGTTTCTGTTCTTTTTTA AAATGGAAATGGCATGTTGAAAGATAATATAATAGTACCAGAATAAGATATAGACAATACATGCCACAGCAGAGTGCAGTATTAGTTGTGGAGTTGTTAG TGGTTTATTGAAAGACAATGCATTTGAGTGCAGTCATTCTTAGGCAGTAAATGCATTTGAGGTGAATTTATGAAGTTTATGCCTATCTTTTAATGCTGGG TTTGTGGATTAATCATAATATAGATGTGAACCTTTTTAATATTTTTATACATCAGCAGTAGAAACCTGTTCAGTTTAAAA
• Tissue: pods
• Gene name: LI_gene_163548;
• Additional information: details;

Expression of Ll_transcript_420056

FPKM

• PAB: 0.1
• PNAB: 1.7
• PS1: 1.2
• PS2: 1.1
• PS3: 1
• PW1: 0.6
• PW2: 0.6
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420056

• Blastp: Peptidyl-prolyl cis-trans isomerase CYP95 from Arabidopsis with 69.23% of identity
• Blastx: Peptidyl-prolyl cis-trans isomerase CYP95 from Arabidopsis with 70.97% of identity
• Eggnog: peptidyl-prolyl cis-trans isomerase activity(COG0652)
• Kegg: Link to kegg annotations (AT4G32420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457887.1)
• Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (PF00160.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;