Ll_transcript_420062

• Id Trinity: TRINITY_DN48729_c0_g1_i18
• Name Transcript: Ll_transcript_420062
• Sequence: TTTCTTTCTGCCCAACTTGATATAAAAGCCTAGTTTATATTCTCATTTATTCCTCTTTCTCCTCTTCTCCGAACGTTCTCTGGTTCTGCGACTCGGATCA ATAGTTGTACCGTTTTAAGTCTTGGTAAATAAAAAGACGATGGCAAAGAAGAGGAATCCCCTAGTGTTTATGGATGTGTCCATTGATGGGGATCCTTTTG AAAGGATGGTGTTTGAGCTTTTGTATGATGTTGCTCCCAAGACAGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAAGGAATCAGTCCAAATACTGG AAAATCATTGCACTACAAGGGATCTTTCTTCCATCACATTGTAAAAGGTTCCTTTGTGCAGGCTGGTGATTTTGCCAATCAAAATGTTGTCCGAGTTGCA AGCCTTGTTCCATTTGCATGTTCCTTATGACAATGGTAACTTCCTTTCTAAGTCAATTTGGGGAACATAATTTAAAAAAATTATGCATGAAAAACCTGTC ACTGAGTGAGCTAATGAACATATTATAATTTGTAATTTTGGGTTTGTTTTGTGATATTGCGTATGTTGAAATTGATATGTATGTGTGTATATGCAAAATT TTAATCCACCTGAATTATTGGGTGCTTTTATCCCTTTGAAGAATTGACATTATACCTTATTGTATTGTAGTTGGTAAATTTTAGCAACCCATTGCCACTT CCTAAATATGCCCCTGATCATTAGTAGGAGTTTATATAGTTTGAACCATTGAAGCACTTTCTTCATAAATATCCTTGAAACACTCATTTCTTACCCTCTG GCTCCATGTTGATCATCATGTAATCCATGCATCATATTTTTGTATGTTTTGTAGGGACTAGTGGAGAAAGCATATATGGCTCAGATTTCTCAGATGAGTC TTCTAGGCTAAAACATGATGCTCCAGGCCTTCTATCCATGGCAATTTCTGACCGTGATACTCTTGGTTCGCATTTTATTATCACTTTGAAAGCTGATCAT CATCTTGATAGGAAGAATGTGGTCTTTGGGAAGCTTGTGCTAGGGCATAATATTTTGAATAAAATTGAAGATGTGGGCGATGAAGAAGGGCGTCCAACTG TAACTGTTAAAATCGCTAATTGTGGTGAATATGCTGAGGCACGGCATAAGGGAAAGCACAAAAAGTCTTCAAAAGACAGAAGGAAAAGGAGAAGAAGATA CTACTTATCTGAATCAGAGAGTTCTCCAGATTCAGACACAGAGTCTTCAGAAACTAATAGTGATTCTGAGTCAGATGTGTCATCATCATCTGACATAAGT TCTTCAAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAGAAAAGATAAACATAGACATGGAAAAAGAAGGAATAAACGCCGCGACAAGAGGCAAAGGA GACGGGATAAGAGATCAAAGCGTAGATCAAGAAGGGAACCAGGCAGTGATTCAGATGGTGAGAGTAACCGAGACGTTAGCTTTGATGGTGCAACTCTTGA TGATCAAGGGAAAGGGCAGAACCATAAAGATCATTCTCAGAAAAATGGAGCTAAAGTTCGGTCTCCCTTAGTTGTGAGAGACAGTCATAACAAGGACAGG GCAGTGGATATGCCAGAGACTGAAGAAGAACTTCCAAAGCTAAATGGAAAATGGCTTACTAATGGCATTGGAGCTGAGTATAGATCTGACCGAAGTGAAG AGAGGCAGCCCGACGTGATGGATTATCATTCAGGAAAATCTAGGAGTCGAAGCATGAGTCCTATGCGACCCATGAGTAATAGTTTGAGTATCAGTGCTCA GAGGAGTCAGATCAAGAGCCCGAGTGTAACTCCAAAAGAGAGATTTAACAGAGGTCCAACTGGTAGCAGAAGCCCTCCAGCACGAAGGAGTGTGAGCAGA AGTCCTGTTAGAAGCATCAGCAGAATTCCATGCGAAAGCATCAGTAGAAGCCCAGTAAGGGGCAGGAAGAGAAGAAGTTTGAGCAGAAGCCCAGCAAGGG GTGGAAAGGGGAGAAGTGTCAGTAGAAGCCCAGTGAGGGGTGGGAAGGATAGAAGTGTCAGTAGAAGTCCTGTGAGGAGTAGGAAGGGGAGAAGTATTAG TAGAAGCCCTGTGAGAAGTCGTTCTTTAAGAAGCATCAGCAAGAGCCCTATAAGGTTCTCCTCTCGAAGTCGCAGGAGTTCTCCCAGAGCATCATCACGA AAAACTATCAGCAGAAGTCCAGTTAGAGTATCAAGAAAGGGTGTTAGCAGGAGTCCAGTTAGATCACCTTCAAGAAGCTTAAGCAGAAGCTCTGGCAGGG TCCCTTCGAGGAGAGGCATTAGCCGAAGTCCTGCCAGAGCACCAAGCAGGAGCAATCGCCGAAGTTACTCTAGGAGTCCTAGTCCTGTTCGTAGGACAAG GACACCTCGTGGGAGGAGTGTGTCGAGGAGTGTTTCACCTGCTGTCAGAAGGGGAAGAGTTTTTAGTGAACGATACTCTTATGCACGAAGGTATAATACT CCCTCGTGGTCTCCTGTGAGGTCATACCGCTACAACGGAAGAGATCGTGACAGATATTCTAGTTACAGAAGGTATTCCCCTAGGCGTTACAGGAGCCCAC CACCACGTGCAAGAACTCCTCCAAGGTACCGAAGCAGGAGGACACCATCTGTTTCCCCCAGCCCACGCTACCGTGCTAGACGCTATAGCCGAAGCCGTAG CCCGGTCAGCAGCCGTTCCCCAATTGAGCCACATCGATCTCACCCCTCTTCTCGTGTGGATAGACGATTATCATCTTCTCGGAGCAAGAGTCCGTCAAAG TCCAGGTCTTCCATGGAATCACAATCTCCACGAAAAGCAAGCAGAGACAAGAGGTCAGGGTTATCCTCCTCTAGAAGCCCAGATGGAAAGAAAGGCCTGG TCTCTTATGGAGATGGTTCTCCCTACTCGGGGTAAAGGTGAAATTTGTGGCCTGAGGGCCTTGGCATACTATCCTTCCTTTTTATGAGTTGGACTCGCCA ATTCTTGAACTCATGCTTTTACTTGTTTGCTATAAATTCTCGATGATACTTATTCCCTTTTATAGACCGCTATTGCATGTTGAAAGATTCTACTACTAGA GTTAGAACAGGATTCAATTTTAGGTGTGGATTTATTGCGATATTTGTTGGATTCCAACGAATTTGAATGTTAGTACCCTAGTTGTTTGTCAGTTAAGGTA TCCGAGTCGAAATTATAATTTTTTGTAGGCGTTTCGGAATGTTGCCCCCTCCCCCTTCCCCCTCCGGCCGGAGGGAGCCTTCAGATTTCTAGTTTATGAT TGAACTGAATTGATCCCGTTACTTCCCTATGCCTGTTCCCTGCCAAGCGGAATGGACAAATGCATGCATTAAACTGTGCTGGAAACCTGAAGGGTTAATA TTTCAAGGAAGACATGTTTTTAAACATTATGAATAAGTCACTTGCTTGTTATGTGGG
• Tissue: pods
• Gene name: LI_gene_163548;
• Additional information: details;

Expression of Ll_transcript_420062

FPKM

• PAB: 0
• PNAB: 5.2
• PS1: 11.2
• PS2: 12.3
• PS3: 14.7
• PW1: 9.7
• PW2: 12.3
• PW3: 9.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420062

• Blastp: Peptidyl-prolyl cis-trans isomerase CYP95 from Arabidopsis with 63.27% of identity
• Blastx: Peptidyl-prolyl cis-trans isomerase CYP95 from Arabidopsis with 78.05% of identity
• Eggnog: peptidyl-prolyl cis-trans isomerase activity(COG0652)
• Kegg: Link to kegg annotations (AT4G32420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416706.1)
• Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (PF00160.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;