Ll_transcript_420046

• Id Trinity: TRINITY_DN48729_c0_g1_i8
• Name Transcript: Ll_transcript_420046
• Sequence: TTTCTTTCTGCCCAACTTGATATAAAAGCCTAGTTTATATTCTCATTTATTCCTCTTTCTCCTCTTCTCCGAACGTTCTCTGGTTCTGCGACTCGGATCA ATAGTTGTACCGTTTTAAGTCTTGGTAAATAAAAAGACGATGGCAAAGAAGAGGAATCCCCTAGTGTTTATGGATGTGTCCATTGATGGGGATCCTTTTG AAAGGATGGTGTTTGAGCTTTTGTATGATGTTGCTCCCAAGACAGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAAGGAATCAGTCCAAATACTGG AAAATCATTGCACTACAAGGGATCTTTCTTCCATCACATTGTAAAAGGTTCCTTTGTGCAGGACACAGGGATGATGGTCACGACTCCTTTTCTTGTGATC TAGTTTTAAGGCTGGTGATTTTGCCAATCAAAATGTTGTCCGAGTTGCAAGCCTTGTTCCATTTGCATGTTCCTTATGACAATGGTAACTTCCTTTCTAA GTCAATTTGGGGAACATAATTTAAAAAAATTATGCATGAAAAACCTGTCACTGAGTGAGCTAATGAACATATTATAATTTGTAATTTTGGGTTTGTTTTG TGATATTGCGTATGTTGAAATTGATATGTATGTGTGTATATGCAAAATTTTAATCCACCTGAATTATTGGGTGCTTTTATCCCTTTGAAGAATTGACATT ATACCTTATTGTATTGTAGTTGGTAAATTTTAGCAACCCATTGCCACTTCCTAAATATGCCCCTGATCATTAGTAGGAGTTTATATAGTTTGAACCATTG AAGCACTTTCTTCATAAATATCCTTGAAACACTCATTTCTTACCCTCTGGCTCCATGTTGATCATCATGTAATCCATGCATCATATTTTTGTATGTTTTG TAGGGACTAGTGGAGAAAGCATATATGGCTCAGATTTCTCAGATGAGTCTTCTAGGCTAAAACATGATGCTCCAGGCCTTCTATCCATGGCAATTTCTGA CCGTGATACTCTTGGTTCGCATTTTATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGAATGTGGTCTTTGGGAAGCTTGTGCTAGGGCATAAT ATTTTGAATAAAATTGAAGATGTGGGCGATGAAGAAGGGCGTCCAACTGTAACTGTTAAAATCGCTAATTGTGGTGAATATGCTGAGGCACGGCATAAGG GAAAGCACAAAAAGTCTTCAAAAGACAGAAGGAAAAGGAGAAGAAGATACTACTTATCTGAATCAGAGAGTTCTCCAGATTCAGACACAGAGTCTTCAGA AACTAATAGTGATTCTGAGTCAGATGTGTCATCATCATCTGACATAAGTTCTTCAAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAGAAAAGATAAA CATAGACATGGAAAAAGAAGGAATAAACGCCGCGACAAGAGGCAAAGGAGACGGGATAAGAGATCAAAGCGTAGATCAAGAAGGGAACCAGGCAGTGATT CAGATGGTGAGAGTAACCGAGACGTTAGCTTTGATGGTGCAACTCTTGATGATCAAGGGAAAGGGCAGAACCATAAAGATCATTCTCAGAAAAATGGAGC TAAAGTTCGGTCTCCCTTAGTTGTGAGAGACAGTCATAACAAGGACAGGGCAGTGGATATGCCAGAGACTGAAGAAGAACTTCCAAAGCTAAATGGAAAA TGGCTTACTAATGGCATTGGAGCTGAGTATAGATCTGACCGAAGTGAAGAGAGGCAGCCCGACGTGATGGATTATCATTCAGGAAAATCTAGGAGTCGAA GCATGAGTCCTATGCGACCCATGAGTAATAGTTTGAGTATCAGTGCTCAGAGGAGTCAGATCAAGAGCCCGAGTGTAACTCCAAAAGAGAGATTTAACAG AGGTCCAACTGGTAGCAGAAGCCCTCCAGCACGAAGGAGTGTGAGCAGAAGTCCTGTTAGAAGCATCAGCAGAATTCCATGCGAAAGCATCAGTAGAAGC CCAGTAAGGGGCAGGAAGAGAAGAAGTTTGAGCAGAAGCCCAGCAAGGGGTGGAAAGGGGAGAAGTGTCAGTAGAAGCCCAGTGAGGGGTGGGAAGGATA GAAGTGTCAGTAGAAGTCCTGTGAGGAGTAGGAAGGGGAGAAGTATTAGTAGAAGCCCTGTGAGAAGTCGTTCTTTAAGAAGCATCAGCAAGAGCCCTAT AAGGTTCTCCTCTCGAAGTCGCAGGAGTTCTCCCAGAGCATCATCACGAAAAACTATCAGCAGAAGTCCAGTTAGAGTATCAAGAAAGGGTGTTAGCAGG AGTCCAGTTAGATCACCTTCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCCTTCGAGGAGAGGCATTAGCCGAAGTCCTGCCAGAGCACCAAGCAGGA GCAATCGCCGAAGTTACTCTAGGAGTCCTAGTCCTGTTCGTAGGACAAGGACACCTCGTGGGAGGAGTGTGTCGAGGAGTGTTTCACCTGCTGTCAGAAG GGGAAGAGTTTTTAGTGAACGATACTCTTATGCACGAAGGTATAATACTCCCTCGTGGTCTCCTGTGAGGTCATACCGCTACAACGGAAGAGATCGTGAC AGATATTCTAGTTACAGAAGGTATTCCCCTAGGCGTTACAGGAGCCCACCACCACGTGCAAGAACTCCTCCAAGGTACCGAAGCAGGAGGACACCATCTG TTTCCCCCAGCCCACGCTACCGTGCTAGACGCTATAGCCGAAGCCGTAGCCCGGTCAGCAGCCGTTCCCCAATTGAGCCACATCGATCTCACCCCTCTTC TCGTGTGGATAGACGATTATCATCTTCTCGGAGCAAGAGTCCGTCAAAGTCCAGGTCTTCCATGGAATCACAATCTCCACGAAAAGCAAGCAGAGACAAG AGGTCAGGGTTATCCTCCTCTAGAAGCCCAGATGGAAAGAAAGGCCTGGTCTCTTATGGAGATGGTTCTCCCTACTCGGGGTAAAGGTGAAATTTGTGGC CTGAGGGCCTTGGCATACTATCCTTCCTTTTTATGAGTTGGACTCGCCAATTCTTGAACTCATGCTTTTACTTGTTTGCTATAAATTCTCGATGATACTT ATTCCCTTTTATAGACCGCTATTGCATGTTGAAAGATTCTACTACTAGAGTTAGAACAGGATTCAATTTTAGGTGTGGATTTATTGCGATATTTGTTGGA TTCCAACGAATTTGAATGTTAGTACCCTAGTTGTTTGTCAGTTAAGGTATCCGAGTCGAAATTATAATTTTTTGTAGGCGTTTCGGAATGTTGCCCCCTC CCCCTTCCCCCTCCGGCCGGAGGGAGCCTTCAGATTTCTAGTTTATGATTGAACTGAATTGATCCCGTTACTTCCCTATGCCTGTTCCCTGCCAAGCGGA ATGGACAAATGCATGCATTAAACTGTGCTGGAAACCTGAAGGGTTAATATTTCAAGGAAGACATGTTTTTAAACATTATGAATAAGTCACTTGCTTGTTA TGTGGG
• Tissue: pods
• Gene name: LI_gene_163548;
• Additional information: details;

Expression of Ll_transcript_420046

FPKM

• PAB: 3.4
• PNAB: 1.5
• PS1: 2.6
• PS2: 1
• PS3: 0.6
• PW1: 1.7
• PW2: 0.6
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420046

• Blastp: Peptidyl-prolyl cis-trans isomerase CYP95 from Arabidopsis with 63.27% of identity
• Blastx: Peptidyl-prolyl cis-trans isomerase CYP95 from Arabidopsis with 63.27% of identity
• Eggnog: peptidyl-prolyl cis-trans isomerase activity(COG0652)
• Kegg: Link to kegg annotations (AT4G32420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416706.1)
• Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (PF00160.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;