Ll_transcript_419341

• Id Trinity: TRINITY_DN48732_c1_g1_i2
• Name Transcript: Ll_transcript_419341
• Sequence: GTTCTATGAGCATAGTGTTATTTATTCACATAACTTCTTTATATTATTTATTGTTATGAGTCAAATGAGGAAACAAAGCTAATGTTGGATATAATGTTTG ATGGAAACCCACTTGAAAGTTAGTGTCTCATTCTTACAGCTGCAGATACCTTCCCTCATTATATGGCTTTCCAATCTTAGGTGTCCTTCTAGAGTTCCCT TCACAGTACAAAAGAGTTTCACTCAATTCACGTTCTTAGCTTTTATGTGCTTCATTTTTTGTTAAATGCTGACCCTTCTAAAGGGTTCTTCTTGTTTCTA CAGGAGCAACTATAACTTTTATTTAGTCTTTCTGTGTTTTGTTTTCCTTTCATGGGATTTCAGATCTGAGTCTCAAGTCTCTATCATGATGTGTACAAGT ACTAGTAAAGTTTAGTGAAGTTGGTGTCTTAAAGTACTATTCTTTGTGTATATCTATATATATATATACATAATATAGTTTTATTGTGTGTGTGTGTGAA GTGTGAATCTGTATTAGTGTATCCAAAAAAAATGGCACCAAGATTGGTTTTTTCCAGTTGGTGGACAAAGGATACAGAGAAAGGAACACCAGTGGTGGTG AAAATGGAGAACCCCACATTTTCTGTTGTGGAGATTAATGGTGCTGATGCTGCATTCAGGCCGGTCGAAAAAAGCCGCGGCAAGAATGCCAAACAAGTCA CATGGGTGTTGTTTCTCAAGGCTCACCGTGCCGTTGGCTGTGTAACTTGGCTTGCCACTGTTTTGTGGACATTGCTTGGTGCCATTAGGAATAGGTTGAT TCATAGAAATGTAGTAGTTGGTGTTGCGGAGAATGAGAGAGACAAGTTTGAAAAAGGGAGGTTGTTGTTTACAATCATTAGAGTGTTCCTAATGATTTCA TTGGTAGTTTTGGCCTTTGAGGTTGTTACTTACCTGCAAGGTTGGCATTTCACAAATCCAACTTTGCACATTCCTAGAACTTCTGATTTGGAAGGGTTGC TCCATATGGCTTATGTTGCTTGGTTAACTTTTAGAGCTGAGTACATTGCTCCACTAATTCAGGCACTTTCGAAGTTTTGTGTTGTTTTGTTTCTTATCCA ATCCGTGGATCGAATGCTTCTTTGTCTGGGGTGCTTTTGGATCAAATTCAAGAAGGTTAAGCCAAGGTTTCATGGAGATCCCTTCAAAACTGATGATGTT GAAGGATCTGCATGGAACTATCCCATGGTCCTTGTTCAAATTCCAATGTGTAATGAGAGGGAGGTGTATGAGCAGTCTATTTCTGCAGTGTGCCAAATTG ATTGGCCGAGGAACCGTTTACTGATTCAAGTACTTGATGATTCGGATGATGAAAGCATACGTTGGTTAATTAAGTCTGAGGTATGTAAGTGGAACCAAAA GGGAGTCAATATAATCTATAGGCATCGCTTACTCCGGACAGGATATAAAGCTGGGAATCTCAATTCTGCCATGAGTTGCGACTATGTGAAAGACTATGAG TTTGTTGCAATTTTCGATGCAGATTTCCAACCAAATGCTGACTTTCTTAAGCAAACTGTGCCACATTTCAAGGACAATCCTGAACTAGGTTTGGTCCAAG CTAGATGGACTTTTGTGAACAAGGATGAAAACTTGTTGACTCGTCTCCAAAACATTAATCTTTGCTTTCATTTCGAGGTAGAGCAACAAGTCAACGGTGT ATTTCTCAATTTTTTTGGCTTCAACGGAACAGCCGGTGTTTGGAGAATCAAAGCCTTAGAAGAATCCGGGGGCTGGCTTGAGAGGACAACTGTAGAAGAT ATGGACATTGCTGTTCGAGCTCATCTCAACGGTTGGAAATTTATCTTCCTAAATGATGTAAAGGTACTTTGTGAAGTTCCGGAATCATATGAAGCTTACA GGAAGCAACAACACCGTTGGCACTCCGGTCCTATGCAACTTTTCAGATTGTGTCTTCCAGCAATTATAAAATCTAAGGTGCCAGCTTGGAAGAAAGCAAA TTTGATATTGCTATTTTTTCTCTTAAGGAAACTGATTCTTCCCTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCCTTAACCATGTTTGTCCCAGAG GCAGAGCTTCCTTTATGGGTTATATGCTATGTGCCTGTGTTTATGTCATTCCTTAACATTCTTCCTGCCCCGAAATCTTTTCCGTTTATTGTTCCTTACC TCCTTTTTGAAAATACCATGTCTGTCACCAAATTCAATGCAATGGTGTCCGGACTTTTCCAATTGGGAAGCTCATATGAATGGGTTGTGACAAAGAAGGC CGGTAGATCATCAGAGTCTGATTTATTGGCTGCCGAAGAAAGGGAAGCAAAGTCGATAATAGAACAACAAAAGATCCATAGAGGAGCTTCTGACAGTGAA CTTCTTGAGTCAAACCAAATTAAGGAACAAAAAGTAGCAGTTTCGGCGCCTATTAAGAAAGCTAATAAAATATATAAGAAAGAGCTGACTTTGGCTTTTA TCCTTCTCACCGCATCGGTTAGGAGTCTGCTATCCGCACAAGGAGTTCACTTCTACTTTCTGCTTTTCCAAGGAGTGACCTTCCTCCTTGTAGGTCTTGA TTTAATTGGAGAACAGATGAGCTAGCTCGCATTCATAACATCGAAGAAGAGAACAAATGGAAAACACCTACTATTTCATTTCCCTGGATGCGCTCTAGCG GCTAAATGAGCAATGCAATAAAGGAAAGTTCAATCCTTTTATTTTTCTTCTGAAACTCATAGTACATGTCTAGCAAACACATAATTTGATTGCAAATACC CAACAGGGTTTCACTGTTTTTCAACTCTATCCATTTTGCATTCACACAAATCATTGCATGTATTCCATATGGCATATAGTTCACAATGGTCATTGTACTC TTACAGATATTGAATTCTTGTTATCTGCTATTGGTAAATTGGGTATGCAAAATAGGACATCTTTCTGTACATTCATTGTTATCTAATGTAAACAATAAAT TTTTATTCTCCAACTCTCTGCATCATAGTTCTTTTTGTTACTTGGGCAATTTACTTGTGTGTTTTACATGCATGACTATGAAATTTGTACAATAAAGAAG TGTCGGCAGGCAAATACTTGAGACAAACACAAGTGGCTTTTGAACATTTAGTTCTGAATCTTCTAATGTGGTCCCTCTAATATGTTCATGGTCCTCAAAA CTGATTTCTTGTCAGAAAACTAACATCACAATTCCAACAGCATAGGACTTTGAGGGGTTGTTAGGCACGTTGCTGTTTTTGCTTTATAATATTGAAAATC TCTTGATGCCACAGCTTACCATACTATGGTACTAAATTGGCCCACTTCTTTGAATGTATATGTCGGTGATGATATTGGAATGCATTGGTCTTCACAATTT CACAAGTGCAAGCAATTCATTTGCAATAGCAACTGTATAAAGTAATATTAGAATAAAGCATATGCTTAATACTTTAGTAACTGATTAGTTGTACTTCTGT TTCTAAGAAACTAATCAGTTACACTTTTCTGTTTTAAATATTTCCTCTTTCTTTTGTATAAATATGGCAAGTCTCTATCCATTCAGATACATTGAATAAA GACACTTTTTTTCACACTTTATCTTTACGTTACTCTTCTTTCTCTCTCTCTCAGTTTCTGGTTTTCATTTGCCTTTTCTCCGTTTCTTCTTCTCTTATAT GGTATCATGCCATGGCCGAAGCTACTAAATCTGGGACTGCTCTGTCATCACCACCTCTCTCTCCTTCCGCTGCTTCACCGTTACAGGCGGTAGCGTCACC GCTGGTACTTCCTCTTCCTTCATCTAAACTCACTGAGAAGAATTATCTTGTATGGAGGCATTTTATGCTAGCAACACTCACCTCAAGCAGAGCAACTCAC ATTGTCCTAGGAACTGAAATTCCTCACCGATTCCTCACAGAAGATGATCGACTCATAAATAACATCAATCCAGCATATCTACGTTGGGAAGAACTTGATC AAACCATTTGTTTCCTGGATCTTGAACTCGTTATCTGAAGGATTACAACCACGAGTTGTTGGCTGTAGACACTCGTGGCAACTATGGGAGGAATTAGATT CCTACTGTAACTCTCAAACGAAGGCACGGAGTAGACAACTTCGCTCTCAACTTCGTTCAATCTCTCAAGGTTCAAGTTCAATTGCTGAATATTTCACAAC AATCAAAGGTTTGGTAGATTCACTAATCTACATCGGAACTCCGATTTCACCTGTTGAACACATCGATTATATACTCGATGGACTTAATGAGGAGTATCAA CCTGTTATTACATCAGTTGAAA
• Tissue: pods
• Gene name: LI_gene_163561;
• Additional information: details;

Expression of Ll_transcript_419341

FPKM

• PAB: 0.6
• PNAB: 8.3
• PS1: 1.8
• PS2: 0.8
• PS3: 1.6
• PW1: 9.2
• PW2: 5.5
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419341

• Blastp: Probable xyloglucan glycosyltransferase 5 from Arabidopsis with 79.29% of identity
• Blastx: Probable xyloglucan glycosyltransferase 5 from Arabidopsis with 79.29% of identity
• Eggnog: Glycosyl transferase, family 2(COG1215)
• Kegg: Link to kegg annotations (AT4G31590)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438365.1)
• Pfam: Glycosyltransferase like family 2 (PF13641.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;