Ll_transcript_419342

• Id Trinity: TRINITY_DN48732_c1_g1_i3
• Name Transcript: Ll_transcript_419342
• Sequence: GTTCTATGAGCATAGTGTTATTTATTCACATAACTTCTTTATATTATTTATTGTTATGAGTCAAATGAGGAAACAAAGCTAATGTTGGATATAATGTTTG ATGGAAACCCACTTGAAAGTTAGTGTCTCATTCTTACAGCTGCAGATACCTTCCCTCATTATATGGCTTTCCAATCTTAGGTGTCCTTCTAGAGTTCCCT TCACAGTACAAAAGAGTTTCACTCAATTCACGTTCTTAGCTTTTATGTGCTTCATTTTTTGTTAAATGCTGACCCTTCTAAAGGGTTCTTCTTGTTTCTA CAGGAGCAACTATAACTTTTATTTAGTCTTTCTGTGTTTTGTTTTCCTTTCATGGGATTTCAGATCTGAGTCTCAAGTCTCTATCATGATGTGTACAAGT ACTAGTAAAGTTTAGTGAAGTTGGTGTCTTAAAGTACTATTCTTTGTGTATATCTATATATATATATACATAATATAGTTTTATTGTGTGTGTGTGTGAA GTGTGAATCTGTATTAGTGTATCCAAAAAAAATGGCACCAAGATTGGTTTTTTCCAGTTGGTGGACAAAGGATACAGAGAAAGGAACACCAGTGGTGGTG AAAATGGAGAACCCCACATTTTCTGTTGTGGAGATTAATGGTGCTGATGCTGCATTCAGGCCGGTCGAAAAAAGCCGCGGCAAGAATGCCAAACAAGTCA CATGGGTGTTGTTTCTCAAGGCTCACCGTGCCGTTGGCTGTGTAACTTGGCTTGCCACTGTTTTGTGGACATTGCTTGGTGCCATTAGGAATAGGTTGAT TCATAGAAATGTAGTAGTTGGTGTTGCGGAGAATGAGAGAGACAAGTTTGAAAAAGGGAGGTTGTTGTTTACAATCATTAGAGTGTTCCTAATGATTTCA TTGGTAGTTTTGGCCTTTGAGGTTGTTACTTACCTGCAAGGTTGGCATTTCACAAATCCAACTTTGCACATTCCTAGAACTTCTGATTTGGAAGGGTTGC TCCATATGGCTTATGTTGCTTGGTTAACTTTTAGAGCTGAGTACATTGCTCCACTAATTCAGGCACTTTCGAAGTTTTGTGTTGTTTTGTTTCTTATCCA ATCCGTGGATCGAATGCTTCTTTGTCTGGGGTGCTTTTGGATCAAATTCAAGAAGGTTAAGCCAAGGTTTCATGGAGATCCCTTCAAAACTGATGATGTT GAAGGATCTGCATGGAACTATCCCATGGTCCTTGTTCAAATTCCAATGTGTAATGAGAGGGAGGTGTATGAGCAGTCTATTTCTGCAGTGTGCCAAATTG ATTGGCCGAGGAACCGTTTACTGATTCAAGTACTTGATGATTCGGATGATGAAAGCATACGTTGGTTAATTAAGTCTGAGGTATGTAAGTGGAACCAAAA GGGAGTCAATATAATCTATAGGCATCGCTTACTCCGGACAGGATATAAAGCTGGGAATCTCAATTCTGCCATGAGTTGCGACTATGTGAAAGACTATGAG TTTGTTGCAATTTTCGATGCAGATTTCCAACCAAATGCTGACTTTCTTAAGCAAACTGTGCCACATTTCAAGGTTAAGATAAGAACATGAAACATATTCA ATAATGATTGTTGGTAAAAGCATGTTTAGCATATTTTACTACATGCCTTTTATTGCAGGACAATCCTGAACTAGGTTTGGTCCAAGCTAGATGGACTTTT GTGAACAAGGATGAAAACTTGTTGACTCGTCTCCAAAACATTAATCTTTGCTTTCATTTCGAGGTAGAGCAACAAGTCAACGGTGTATTTCTCAATTTTT TTGGCTTCAACGGAACAGCCGGTGTTTGGAGAATCAAAGCCTTAGAAGAATCCGGGGGCTGGCTTGAGAGGACAACTGTAGAAGATATGGACATTGCTGT TCGAGCTCATCTCAACGGTTGGAAATTTATCTTCCTAAATGATGTAAAGGTACTTTGTGAAGTTCCGGAATCATATGAAGCTTACAGGAAGCAACAACAC CGTTGGCACTCCGGTCCTATGCAACTTTTCAGATTGTGTCTTCCAGCAATTATAAAATCTAAGGTGCCAGCTTGGAAGAAAGCAAATTTGATATTGCTAT TTTTTCTCTTAAGGAAACTGATTCTTCCCTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCCTTAACCATGTTTGTCCCAGAGGCAGAGCTTCCTTT ATGGGTTATATGCTATGTGCCTGTGTTTATGTCATTCCTTAACATTCTTCC
• Tissue: pods
• Gene name: LI_gene_163561;
• Additional information: details;

Expression of Ll_transcript_419342

FPKM

• PAB: 0.2
• PNAB: 2.2
• PS1: 0.8
• PS2: 0.2
• PS3: 0.7
• PW1: 3.3
• PW2: 1.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419342

• Blastp: Probable xyloglucan glycosyltransferase 5 from Arabidopsis with 71.63% of identity
• Blastx: Probable xyloglucan glycosyltransferase 5 from Arabidopsis with 71.63% of identity
• Eggnog: Glycosyl transferase, family 2(COG1215)
• Kegg: Link to kegg annotations (AT4G31590)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438365.1)
• Pfam: Glycosyl transferase family 2 (PF00535.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;