Id Trinity | TRINITY_DN48732_c1_g1_i4 |
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Name Transcript | Ll_transcript_419343 |
Sequence | GTTCTATGAGCATAGTGTTATTTATTCACATAACTTCTTTATATTATTTATTGTTATGAGTCAAATGAGGAAACAAAGCTAATGTTGGATATAATGTTTG ATGGAAACCCACTTGAAAGTTAGTGTCTCATTCTTACAGCTGCAGATACCTTCCCTCATTATATGGCTTTCCAATCTTAGGTGTCCTTCTAGAGTTCCCT TCACAGTACAAAAGAGTTTCACTCAATTCACGTTCTTAGCTTTTATGTGCTTCATTTTTTGTTAAATGCTGACCCTTCTAAAGGGTTCTTCTTGTTTCTA CAGGAGCAACTATAACTTTTATTTAGTCTTTCTGTGTTTTGTTTTCCTTTCATGGGATTTCAGATCTGAGTCTCAAGTCTCTATCATGATGTGTACAAGT ACTAGTAAAGTTTAGTGAAGTTGGTGTCTTAAAGTACTATTCTTTGTGTATATCTATATATATATATACATAATATAGTTTTATTGTGTGTGTGTGTGAA GTGTGAATCTGTATTAGTGTATCCAAAAAAAATGGCACCAAGATTGGTTTTTTCCAGTTGGTGGACAAAGGATACAGAGAAAGGAACACCAGTGGTGGTG AAAATGGAGAACCCCACATTTTCTGTTGTGGAGATTAATGGTGCTGATGCTGCATTCAGGCCGGTCGAAAAAAGCCGCGGCAAGAATGCCAAACAAGTCA CATGGGTGTTGTTTCTCAAGGCTCACCGTGCCGTTGGCTGTGTAACTTGGCTTGCCACTGTTTTGTGGACATTGCTTGGTGCCATTAGGAATAGGTTGAT TCATAGAAATGTAGTAGTTGGTGTTGCGGAGAATGAGAGAGACAAGTTTGAAAAAGGGAGGTTGTTGTTTACAATCATTAGAGTGTTCCTAATGATTTCA TTGGTAGTTTTGGCCTTTGAGGTTGTTACTTACCTGCAAGGTTGGCATTTCACAAATCCAACTTTGCACATTCCTAGAACTTCTGATTTGGAAGGGTTGC TCCATATGGCTTATGTTGCTTGGTTAACTTTTAGAGCTGAGTACATTGCTCCACTAATTCAGGCACTTTCGAAGTTTTGTGTTGTTTTGTTTCTTATCCA ATCCGTGGATCGAATGCTTCTTTGTCTGGGGTGCTTTTGGATCAAATTCAAGAAGGTTAAGCCAAGGTTTCATGGAGATCCCTTCAAAACTGATGATGTT GAAGGATCTGCATGGAACTATCCCATGGTCCTTGTTCAAATTCCAATGTGTAATGAGAGGGAGGTATGACACAAAACTTTTTGTACTCAATTTGTCACTC ATTTGGTAAACCAAGTTGTTTCTTTCTAGTTCTAACTTCAGCTGCTTTATTTAGCCAGGAATATATTTGGCAAATTTCATAAGAATATAAGATAAGAAGG TTTATATTACCTTATTTGCAAATAATGCTTTGAGAATTAGAAGAATGCACAACAAAGAAAAAAGGAAAATTGAGGGGAAGTACATTTTTAGCATCAAGCC ATTTATTTCTCATCTAGGTTGAGATATTTTGACTTTGAGTTTATAACTAACTTGGGATTTATATAAATCCTTCTACAATTAGAAGCATAAATAATTCACC TTAGCGCTAAGGCCTAAATAAAACTTAGAGTTGTCAGTTCCCAATTTTCAGTTTCTGTAATATACAGAACATCCTCATAATTGAGAGGACAAGTTTTATT TTTTTTGGCTTTGTCTGTGCCGAGTTTATGCAGGTGTATGAGCAGTCTATTTCTGCAGTGTGCCAAATTGATTGGCCGAGGAACCGTTTACTGATTCAAG TACTTGATGATTCGGATGATGAAAGCATACGTTGGTTAATTAAGTCTGAGGTATGTAAGTGGAACCAAAAGGGAGTCAATATAATCTATAGGCATCGCTT ACTCCGGACAGGATATAAAGCTGGGAATCTCAATTCTGCCATGAGTTGCGACTATGTGAAAGACTATGAGTTTGTTGCAATTTTCGATGCAGATTTCCAA CCAAATGCTGACTTTCTTAAGCAAACTGTGCCACATTTCAAGGACAATCCTGAACTAGGTTTGGTCCAAGCTAGATGGACTTTTGTGAACAAGGATGAAA ACTTGTTGACTCGTCTCCAAAACATTAATCTTTGCTTTCATTTCGAGGTAGAGCAACAAGTCAACGGTGTATTTCTCAATTTTTTTGGCTTCAACGGAAC AGCCGGTGTTTGGAGAATCAAAGCCTTAGAAGAATCCGGGGGCTGGCTTGAGAGGACAACTGTAGAAGATATGGACATTGCTGTTCGAGCTCATCTCAAC GGTTGGAAATTTATCTTCCTAAATGATGTAAAGGTACTTTGTGAAGTTCCGGAATCATATGAAGCTTACAGGAAGCAACAACACCGTTGGCACTCCGGTC CTATGCAACTTTTCAGATTGTGTCTTCCAGCAATTATAAAATCTAAGGTGCCAGCTTGGAAGAAAGCAAATTTGATATTGCTATTTTTTCTCTTAAGGAA ACTGATTCTTCCCTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCCTTAACCATGTTTGTCCCAGAGGCAGAGCTTCCTTTATGGGTTATATGCTAT GTGCCTGTGTTTATGTCATTCCTTAACATTCTTCCTGCCCCGAAATCTTTTCCGTTTATTGTTCCTTACCTCCTTTTTGAAAATACCATGTCTGTCACCA AATTCAATGCAATGGTGTCCGGACTTTTCCAATTGGGAAGCTCATATGAATGGGTTGTGACAAAGAAGGCCGGTAGATCATCAGAGTCTGATTTATTGGC TGCCGAAGAAAGGGAAGCAAAGTCGATAATAGAACAACAAAAGATCCATAGAGGAGCTTCTGACAGTGAACTTCTTGAGTCAAACCAAATTAAGGAACAA AAAGTAGCAGTTTCGGCGCCTATTAAGAAAGCTAATAAAATATATAAGAAAGAGCTGACTTTGGCTTTTATCCTTCTCACCGCATCGGTTAGGAGTCTGC TATCCGCACAAGGAGTTCACTTCTACTTTCTGCTTTTCCAAGGAGTGACCTTCCTCCTTGTAGGTCTTGATTTAATTGGAGAACAGATGAGCTAGCTCGC ATTCATAACATCGAAGAAGAGAACAAATGGAAAACACCTACTATTTCATTTCCCTGGATGCGCTCTAGCGGCTAAATGAGCAATGCAATAAAGGAAAGTT CAATCCTTTTATTTTTCTTCTGAAACTCATAGTACATGTCTAGCAAACACATAATTTGATTGCAAATACCCAACAGGGTTTCACTGTTTTTCAACTCTAT CCATTTTGCATTCACACAAATCATTGCATGTATTCCATATGGCATATAGTTCACAATGGTCATTGTACTCTTACAGATATTGAATTCTTGTTATCTGCTA TTGGTAAATTGGGTATGCAAAATAGGACATCTTTCTGTACATTCATTGTTATCTAATGTAAACAATAAATTTTTATTCTCCAACTCTCTGCATCATAGTT CTTTTTGTTACTTGGGCAATTTACTTGTGTGTTTTACATGCATGACTATGAAATTTGTACAATAAAGAAGTGTCGGCAGGCAAATACTTGAGACAAACAC AAGTGGCTTTTGAACATTTAGTTCTGAATCTTCTAATGTGGTCCCTCTAATATGTTCATGGTCCTCAAAACTGATTTCTTGTCAGAAAACTAACATCACA ATTCCAACAGCATAGGACTTTGAGGGGTTGTTAGGCACGTTGCTGTTTTTGCTTTATAATATTGAAAATCTCTTGATGCCACAGCTTACCATACTATGGT ACTAAATTGGCCCACTTCTTTGAATGTATATGTCGGTGATGATATTGGAATGCATTGGTCTTCACAATTTCACAAGTGCAAGCAATTCATTTGCAATAGC AACTGTATAAAGTAATATTAGAATAAAGCATATGCTTAATACTTTAGTAACTGATTAGTTGTACTTCTGTTTCTAAGAAACTAATCAGTTACACTTTTCT GTTTTAAATATTTCCTCTTTCTTTTGTATAAATATGGCAAGTCTCTATCCATTCAGATACATTGAATAAAGACACTTTTTTTCACACTTTATCTTTACGT TACTCTTCTTTCTCTCTCTCTCAGTTTCTGGTTTTCATTTGCCTTTTCTCCGTTTCTTCTTCTCTTATATGGTATCATGCCATGGCCGAAGCTACTAAAT CTGGGACTGCTCTGTCATCACCACCTCTCTCTCCTTCCGCTGCTTCACCGTTACAGGCGGTAGCGTCACCGCTGGTACTTCCTCTTCCTTCATCTAAACT CACTGAGAAGAATTATCTTGTATGGAGGCATTTTATGCTAGCAACACTCACCTCAAGCAGAGCAACTCACATTGTCCTAGGAACTGAAATTCCTCACCGA TTCCTCACAGAAGATGATCGACTCATAAATAACATCAATCCAGCATATCTACGTTGGGAAGAACTTGATCAAACCATTTGTTTCCTGGATCTTGAACTCG TTATCTGAAGGATTACAACCACGAGTTGTTGGCTGTAGACACTCGTGGCAACTATGGGAGGAATTAGATTCCTACTGTAACTCTCAAACGAAGGCACGGA GTAGACAACTTCGCTCTCAACTTCGTTCAATCTCTCAAGGTTCAAGTTCAATTGCTGAATATTTCACAACAATCAAAGGTTTGGTAGATTCACTAATCTA CATCGGAACTCCGATTTCACCTGTTGAACACATCGATTATATACTCGATGGACTTAATGAGGAGTATCAACCTGTTATTACATCAGTTGAAAGCCAACTC GACTTGCCTACTGTTCACAATCTTGAATCATTCTTGCTGACTTTTAAATCACGTTTGGAAAAGAACAAAACAAAGGCTCTGTCCGATGCTCTTTCTGCGA ATGTCGTTGTTCATGCTCCTTCTTCTCCGTCGTCAAAGTACGTTGAATCCTTCCCTCGGCATCACTTAGTTCCAGCACGAACAACACTTGCGTACTTCTC ACCGCGATCTGAAAACCACTCACCAATGTTTGGAGGCGGTTATGGAAACTATCGCAGTAACAGAGGAGGTCGCCGAGGAGGAAGGAACCGAGGAGGAAGA AGCTATGGACGTCACACGACATCGTTTTGCGTTTACTGCAACAAATATGGCCATGATGTATCTCAATGTTACTATGCACCAGCTAATTTTGGAGCAACTT ACTCCAACTTACCTCATCATTTGCCACGTCAACAATTAGGGCCACTTCAGCCTCTATCTTCTTATCAACAGAACGTTGGGCCTTCTGCTAGGTATCCAGC CCACTTTATGCCTGAATATCCTAGTGATTTTAATTCTGCATCACTGTTTCCACACGGGCCACCTACCTCCACTCATCCATTTCATGACTCATCCATCCTT AGGCCAGGCCCACATCATTATCCAAAACAGTTTCCATCTCAGTTTGCTATGGCTGCTACTACTCACAAAGGAACCACTGTCTCCATGGAGAATAAGAAGT TGGTTTGGTACCCTGACTCAGGGGCCACTAATCACTTAACAGCTTATCCATACCTGGTTCATGAACCCGTAGAGGCCTTCACTCATGATCAAATCTATAT GGGTAATGGAACGGGTATCCCAATTCTGTCTGTTGGTAAATCATATATTGCTTCTGATCATCATGATTTATTTACACTAAATAATCTTCTGCTTGTTCCA TCCATAACTAAGAATATGTTAAGTGTGTCTCAATTTGCAAAAGAGAATCATTATTACTTTGAGTTTCATCCTAATGTTTGTTATGTGAAATCACAGGGTT CTAATAAAATTCTTCTTCAAGGCTTACTTACCAAGGAAGGACTCTATGCTTTCCAAGGTGTTCATCCCACTCATTATGCGTCTACATGTGCAGTTTCTTC CACTGCCAATAATAAACCTAGTTTTTGTAATAGTGCAGACACTATGTTTAGTGCTGCATCTTGTAATAAATCTAGTTATACTATGTGTAATGAGCCTAAC TCAACTCCTTCTGTATTTTTGCTTTGGCATCTTCGTTTGGGCCATCCTCATGAAACAATTGTCAAAAATGTATTGACAAATTGTAAGGTTTCTCATAGTA ATAAAACAGTGTTTGATTTTTGTTCATCCTGTTATATTGGCAAATCTCATAGAATATATTCTCCTGCTTCTTCTACTGTTTACAATAATCCATTGTAGAT GCTCATACCAAACATACATGGATTTTTCTCCTTAAGCAGAAATCTGAAACTCTTGTATTGTTTCAACACTTTGTGAAATATGTTCATACTCAATTCAATC TTACTCTTAAAGCTGTC BLAST |
Tissue | pods |
Gene name | LI_gene_163561; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_419343
Blastp | Probable xyloglucan glycosyltransferase 8 from Arabidopsis with 84.58% of identity |
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Blastx | Probable xyloglucan glycosyltransferase 8 from Arabidopsis with 83.91% of identity |
Eggnog | Glycosyl transferase, family 2(COG1215) |
Kegg | Link to kegg annotations (AT2G24630) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438365.1) |
Pfam | Glycosyl transferase family 2 (PF00535.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |