| Id Trinity | TRINITY_DN48733_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_419947 |
| Sequence | TGCATCTGTCCTCCCAGACCCTATTAGGTGGGTTTCTCATGCATTGGGCCGCCCTTTTTCTCACATTCTTTTTGCTGTTATAATTTATTGTCTATATCAT TTCATGCAACTTTATATCATTACCATAGAGCCTTTTTTCTAATACTTCCTCCCTATGCCAATGTCAAGCTTTATTTCTTTTATGGAGTGCTGACTTCAAA AGATTGTTCCAGAATGAAAATTATACACAACTTTGAAGTGCTAGCTGTTGCTTCTTGCAGATATATGCGGTTTGTTGGTGTCTTTGGATTATTTGTAGTC CCTAGTTCCGTGTCTTTCTTTCTTTGTATCATGACTTGTACAGTAGCCTATATCTATTATTCATGTGATATAAGGCTGTTTAAATGGAGGGGGGTCTGTG TTCTGTTGTATATTTGTGATAACGTGCTGAACTTGAATGGGAAAATTCACTAATGATGAGGAGAAAAAGTGCTGTATGATGATAACATACTGAAAGAGAA AAATACGAGGAAATATATTATTTACAGAAGATGTATCTTTACCGTCATGGTATTTGCTGTAAACCCCTTATTCACATCATGGCTTGTTTCATGAGCACTC TGTTATTCCATTTGTTTAGCTGGAATCGATGTCCTTAAAAAACTGAGGATCAGAATACTTTTCTAATAGACTGGTCCATATGTGCAACTGGTTCTGTGTA AGATCCCCAAGCTTAGATGTGCAATAACAAATAGCATATGAGGTTAATGTCAGATTACTTTATTCAATGATAGGACTTCTGGTCACATTATCGTGTTGAG ACTGATACATTTCCAGCAGTATGGGTATTCGATTTTAGTTGAAAGATTCTTCAGAATGGATTCTGCTGTTTGGTATTGTTGAAAGCATTATTTTTTCATG GCAACCATTTTATGCTTCATTCCATAAATCTATGGTACTGCAGTGTTTCCTGAAGGATCATGATTATACTTATGTGGCTATGCCAGCTGGCATCATATTT TGATCTGGAGCAAGTTCCGTGAATTTCTCAATCATTTAATGTACAAATGTACTGCTTCAGTGTATGGACCTTATTTTATTAATTGACTGATACTTCTGGA TAAGATGTGGCTACTTCGACAAAGGCAACATGGAGTTGTTAGTGGAGAATATGTCAGGAGTAACCCAAATCTGATAGCATGTGGATGGATTTTTATTTCT TATGCGTCTTGGATATATCTCTACATTTGAGATTGTATTTTATATCTTACTGCTCAACAATATGAGGATGTGAACTGTTCTTAATCTATTGCTACCTTGA TTACACGATAAAAGCTGTGGATTTTATATATGTCATAATATGAGGGCACTAGTTTCTATCGTCCTTTTGGTCTAACACGGGGGGCACTATTACTATTCAT TAATATGTTTCTCTTGTTATTCCGGTTAATGGGAGGAGAGAGTATCCAGGTAATGACTTGAGGGATAAACTTGACAGAAGGTATTTATCACCTCCTCGAA GGTACTCACCACCTAGAGATGGAAGAGGACCCCAGGCCATTCATGGTTACAGTCCCTCAAGGTCCTCAGAGAAAAAAAGTGACAGAAGGCATATAAGGAA GCAAGGAACTAGCAGCCAACGTGATAATCTTGAAAGTTTAAAATTCTCGGATAGAATTCCAGATCAAGTTAAAGAAGGAAAATTGTTTTCCTCTGGTTCT AGAAATACACTTGATGAACAGCTGAAGAAAGTAGAGTCAGATATCAACACTCTTCAGAACCGAAAATTCCAACTAGAGGTCTACCTGGATGAGAGTGTTC AAGAAGTGGATAGCCTTAATTCTACAATTCAGGAACTTGATGCTCAATTATGCAAAGAGAAGGAAGAGTGTAGAAGGTCGGGAACGTTACAACATCTACT TGATGATGTGTCGTTATTCCATTTCCATTTATCCATTTTCAATGCATACATTTTGCTAATGATGTTCTTTTTCCTTGATTTTACTTTTCCCTTGTTATAA CTGAAAAATTTAGAATTACTTCAAGAATAAGGCAGTTTATTAGAGTGCACCATCATAATTCCCAGTTACAAGATGAACTGCAGAGATCACAGGTCCGACT TCAAAGGTTTGGAGATGAACTTGTCTCTGACATTTCTAGAATTGGTGCCAGTGAAGAAGATTTAAGCATTGATATTGTTAGCAATGGTGAGAATCCGGCT CTTCCTCTGGCTATCAAACATAATGTGGATCAGAATGATGCATCTCCCCACAGGAAAAGGCAGCATGTTAAACAAGATGCTGTGGAAGAGTTGAAACAAG GTAGTAGTTATGAAAAGTACTTTGAGAAATTGGCAAATGTTTCCATTTTCCAGAACCAGAAATACTGTGACCTTTGCTAAGTAGAACAGGGGAGAATATC AAAACTCAATTTGTTTCATCTATCTGTGGGACGTGGGAACCATGTTTAGACAAACCTATAATTTAGCAAGTATCTTTGCATCCTTTTTTATCTGGTAAGG AATAATTCAGAGTCGTCTGTTAAGGGCTTATGTTTAGTAACTCAGATGGTTCTGGACCACAAGCATTTGAGGGTGTTGTTATTCTGTTGTCAAGAATAAA TGGACAAGTTTGAACTTTTAACTAGTCTTTCATGCTTGTTTGCTGTTAATATTCAATTAGAACATTGATTACAGAATATCCTCTCTCAGTTTGTATTGCA TCAGTGGTAATTATTAATGTTTTGCTGCCCTTGAGCTAAATTATGCTTTTCATCTAGCCTCTACACTTTCTTTTTATGCTGACTTCTCCATTAACATTTG TGCAGATAGATCAAAAGTTGGGAATCTGGTTGGAACATCAAGAACCAGGAAGCGATCTCGTTGGAATTTGCCTGCTCAGTTGAATGACAAGGATGAAGAG AACATTGATGTCCCCCTAAACACTGGAACTGAAGTTACTAGGACCATCAATCATGAAGGGAAGCACAAAAGAGGAATAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_163566; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_419947
| Blastp | - |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 40 from Arabidopsis with 38.26% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG4112ATJ) |
| Kegg | Link to kegg annotations (AT3G21810) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453763.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |