Ll_transcript_420938

• Id Trinity: TRINITY_DN48738_c0_g1_i1
• Name Transcript: Ll_transcript_420938
• Sequence: GAAAAGTATAATTAACAGTGAGAGATATATAGAGAGAAAGTTGATTCCGTGCACCCTCTTCTTTGTTCCTCATTTATAAATCATCACACTTCTATGTGTA GGTAACTTGTTTGCATCTCCTCGATTTGATCGTTCCTTCTTCTCTCTCTCTACTGTCCACTAAATTGCAGTGCAGTATCAGTGGCAGATAAGAGATGGAG AGTTTTCATTGGGAAGGTAAAACCCTTTCTTTGCACCAGTGCATATCATGAACCCTTTTTTCCTCTCTATTCTTTCGGTAACTCAAGTAAAATTTATCTC TCTCTGTGTGTTGCACTGCGTGCACTGTGCTGCTTCTTTCTTATCTCTCTCATCACTTGTGTATCACATGTAACCGTGTGAGAATAGTTCATTAAGGCAA CTGCATGAGTTATTGTTATTAATGCTCAGAAAATGGGTGGAAAGAAATATTAAAATCTATCTGTGCAGGCTTTACCAGAGATAGAGAGTGGAAAAACAAA ACATCTCTATCTCTACTACTTCTTTTCTTCATGTAACTGACCATAACAACTATAGCTACCAGTGTCACTATTTAGGATTTTTCTGTAAAAAGGCTGATAC TTTTAGCATAAAATCCGGGAGAGTCCTGAAAGTGAAAGACAAAAAGCCCTTCATAAAATACATAGAGAGTGAAAGAAAGAAAGGGAAGTAAGAGAAGAAG GGTCTCTTTGGTTATTTATTACCGGGGGGGCTAGTGAATGAGTGAGTGAAGAGGGGGCAATGGAGGGTGGTAGTTCAAATGGCACTTCTTGTTTGATGCC TTTTGGAGAGAACAGTGGTGGGCTATATCCAATAATGGTGATGCCTTTAGTGACTTCTAATCATGGTGGTCATCATCCAATAAATCCTCATAATCTTAAT CATAATAATAGTAACAATAATTTTACAACTACTGGTACTATTAATGCAAACACAAATTGTCTCTTCCCTTCTATGCCTTCTTCCACTAATGATCATCAAC ACCAACACCACAACAGTGGAGGAAACCCTCCTCTCATGCTAGAGAATAATCACAACAGCAACACTGGGATAGGTTATTATTTCATGGAGAGTGACCACAA CAACAACAATGGAAGCTCCTCTTCCTCTTCTTCTGCTGACAAGGCCAAAATCATGGCCCATCCTCACTATCACCGTCTCTTGGCAGCCTACGTCAGTTGT CAAAAGGTTGGAGCACCGCCTGAAGTGGTGGCAAGGTTAGAAGAAGCATGTGCATCTGCAGTGGCTATGGCAGGAGACACAGCTGGATCAGCATGCCTAG GTGAAGATCCAGCACTGGATCAGTTCATGGAGGCTTACTGTGAGATGCTGACCAAGTATGAACAAGAACTCTCTAAACCCTTGAAGGAAGCCATGCTCTT CCTTCAAAGGATCGAATGCCAGTTCAAAAATCTCACTGTTACTTCTGATCTTGCTTGTAATGAAGCTACCGAAAGGTATGGATCATCGGAAGAAGATGTT GATCTACACAACATCATAGATCCTCAGGTAGAGGACCGGGAGTTGAAGGGCCATCTTTTGCGCAAGTACAGCGGATACTTAGGTAGTCTAAAGCAAGAAT TCATGAAGAAGAGGAAAAAAGGAAAGCTACCTAAAGAAGCAAGGCAACAATTACTTGAATGGTGGAGCAGACATTACAAATGGCCTTACCCTTCGGAATC ACAGAAGCTGGCTCTGGCAGAATCAACAGGTCTAGATCAGAAGCAAATCAACAACTGGTTTATTAATCAAAGGAAACGGCACTGGAAGCCTTCAGAAGAC ATGCCATTTTATTCCAATATGATGGATCCAAACCACCCACAATATTATATGGATAATGTTATGAGCCATCCTTTTCCTATGGATCTCTCCAACACAATGC TCTAGAATTTATTACTATTTGATTTGATGCAATCTGATAGATTCTGTGTGTTAAAGTTACCATGCAACCCTAAGGGCATGTATGTCACTTGAAATCTAAA ACCTTATAATTATGATGTATTAGTATGTGACTATGTGTTAGTATGCATGTGTTCAGTGTTGGAATTTAAATGGTCCTTATGTGGGTCATTTCTAGTGAAG AAAATGTTGAAATATAATATATTTGTATGGATCATGAATAAATAAATTTCCACGATATCATG
• Tissue: pods
• Gene name: LI_gene_163606;
• Additional information: details;

Expression of Ll_transcript_420938

FPKM

• PAB: 3
• PNAB: 8.1
• PS1: 0.1
• PS2: 0.6
• PS3: 0.4
• PW1: 0.5
• PW2: 0.6
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420938

• Blastp: Homeobox protein SBH1 from Soja with 69.9% of identity
• Blastx: Homeobox protein SBH1 from Soja with 70.41% of identity
• Eggnog: homeobox(ENOG410XPMQ)
• Kegg: Link to kegg annotations (547796)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424728.1)
• Pfam: KNOX1 domain (PF03790.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;