Ll_transcript_419430

• Id Trinity: TRINITY_DN48740_c1_g1_i13
• Name Transcript: Ll_transcript_419430
• Sequence: GAGCCTTTTTCCTTCTTCTTTCTCTCATTCAATTCCTCTTAACTCCATCTTTGATCATCATCTATATTCATAGCTAGTTAGTCCAGAAATAATAACTAGG GTTAATCAAAAACAAGATTACATAAAATCCTCATCATTTTGCTTCATGTCATTTTAAGAAAGAACACAAATTACTTTTTGCTTATTTAATTTCATCATTG AAGTGACAAATAATATCAACTATTTTTGTTTTGTTGCTTTGTTTTGGTGATTACTCTCAGCTTTCAGCCATGGAGTTTGATCCAAATATGGAAGCAGGAA CAGAAGGGTGTTCTTCAAATCAGAAAAAAACTGGAAGAGGGAAAATAGAAATCAAAAGGATCGAGAACACAACAAATAGACAAGTTACTTTCTGCAAGCG CCGAAATGGGTTGCTGAAGAAAGCATATGAACTATCAGTATTGTGTGATGCAGAAGTTGCTCTTGTTGTCTTCTCTAACCGTGGCCGTCTCTATGAATAT GCCAACAACAGTGTTAGAGGAACTATCGAAAGGTACAAAAAAGCATCTGCTACTTCCACAAATGCAGAATCTGTATCTGAAGCTAATACACAGTTTTATC AGCAGGAGTCATCCAAATTAAAGAGACAAATCCGAGACATTCAGAATCTGAACAGGCACATTCTTGGTGAATCACTTAGCTCTCTGAGTCTCAAGGAACT AAAGAACCTTGAGAGTAGATTGGAGAAAGGTTTAAGCAGAGTTAGATCTAGAAAGCATGAAACTTTGTTTGCTGACGTCGAGTTCATGCAAAAGCGGGAA GTTGAGCTGCAAAACCATAATAACTATCTGAGAGCTAAGATAGCTGAATATGAGAGAGCACAACAACAGCAACCAAATATGATGCAGCAGGGAAATGTGT GTGAGACCATAGCATCACAACAATATGATAGGAACTTCTTCCCAGTAAATCTCCTAGATCCCAATCATCAATATTCACGTCAAGACCACACTGCTCTCCA ACTTGTTTGATGAGGTAGAAAGCCGCTGGAAATTCTGCTACAGCCTATCCATGATTTAATCAGTGCCTTTAGAATTTCCTTTATGAAGTTCTTCAAACTG AGATTTACCTAGAAAAAAGATACCAGCATTTGGCACCTATATACTTTATAAAATATTGTTTAACCTTTCATTAATTAAGAACTACTTTATATAAACTCCT AGCTAGTACATTTTATGTGTTTGATTGAACCTACTACTATAAAATATATGTTGAAATATGCACTCAGCATTGATTTTTTTTTTTTTT
• Tissue: pods
• Gene name: LI_gene_163621;
• Additional information: details;

Expression of Ll_transcript_419430

FPKM

• PAB: 0.2
• PNAB: 6
• PS1: 20.5
• PS2: 12.1
• PS3: 27.4
• PW1: 0.6
• PW2: 4.1
• PW3: 8.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419430

• Blastp: Agamous-like MADS-box protein AGL5 from Arabidopsis with 70.61% of identity
• Blastx: Agamous-like MADS-box protein AGL1 from Arabidopsis with 68.29% of identity
• Eggnog: Transcription factor(COG5068)
• Kegg: Link to kegg annotations (AT2G42830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435313.1)
• Pfam: SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;