| Id Trinity | TRINITY_DN48740_c1_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_419439 |
| Sequence | GAGCCTTTTTCCTTCTTCTTTCTCTCATTCAATTCCTCTTAACTCCATCTTTGATCATCATCTATATTCATAGCTAGTTAGTCCAGAAATAATAACTAGG GTTAATCAAAAACAAGATTACATAAAATCCTCATCATTTTGCTTCATGTCATTTTAAGAAAGAACACAAATTACTTTTTGCTTATTTAATTTCATCATTG AAGTGACAAATAATATCAACTATTTTTGTTTTGTTGCTTTGTTTTGGTGATTACTCTCAGCTTTCAGCCATGGAGTTTGATCCAAATATGGAAGCAGGAA CAGAAGGGTGTTCTTCAAATCAGAAAAAAACTGGAAGAGGGAAAATAGAAATCAAAAGGATCGAGAACACAACAAATAGACAAGTTACTTTCTGCAAGCG CCGAAATGGGTTGCTGAAGAAAGCATATGAACTATCAGTATTGTGTGATGCAGAAGTTGCTCTTGTTGTCTTCTCTAACCGTGGCCGTCTCTATGAATAT GCCAACAACAGTGTTAGAGGAACTATCGAAAGGTACAAAAAAGCATCTGCTACTTCCACAAATGCAGAATCTGTATCTGAAGCTAATACACAGTTTTATC AGCAGGAGTCATCCAAATTAAAGAGACAAATCCGAGACATTCAGAATCTGAACAGGCACATTCTTGGTGAATCACTTAGCTCTCTGAGTCTCAAGGAACT AAAGAACCTTGAGAGTAGATTGGAGAAAGGTTTAAGCAGAGTTAGATCTAGAAAGGTATTATATAAGCTTAATTAGCATGTGACTAATTTAATTAAGCCA TTTGGCATGTGAACCTCTAAAAGATAATTTCATTTTTTCCTAGTATTTTTAAAATAAATATGCATTATATATTTTCCTAGTATTCTATGGTTTGACAAAC CCAAATTCTTGCAGCATGAAACTTTGTTTGCTGACGTCGAGTTCATGCAAAAGCGGGTACCCATCATTTCCTTTGATGTTATTAATTTTTGCTACTTTAT CTTCAACAGAAATAATGAAAAAAAAACAACAACACAAACTCCTCCCAATTCTGTTAAAATAGAATACTTACATGGGTATAATACCTCTTCTAACAAATGT ATACTTAACACAATGTGCAGGAAGTTGAGCTGCAAAACCATAATAACTATCTGAGAGCTAAGGTATCTCTCATTACTTCCATAACTAACACACAGAGAGG TTAAGATATTAATGTGAAATGACATTAAATTTGAGTGTCATTAATTAGTAGAGTAAGATGAATAACAAGAGTATTGATGGATGGTGCAGATAGCTGAATA TGAGAGAGCACAACAACAGCAACCAAATATGATGCAGCAGGGAAATGTGTGTGAGACCATAGCATCACAACAATATGATAGGAACTTCTTCCCAGTAAAT CTCCTAGATCCCAATCATCAATATTCACGTCAAGACCACACTGCTCTCCAACTTGTGTAAGTACTGCCTAGCACATGCACCTCTCACTCTTACAATTTGT TGTTAAATTTGCAAAAACAACTCGGGAAATTAATGAGTGGTGCCTTAAGAAAAACATTGGTCTAAGAAAAACATGCATAATGAGTCATTCTAATTCTCAA TTTTTTGCTTTGTAATGGTACTTATTAGATGGGTCCTATATAATATTAGGGCTATCTTTTACAAGCTCTGGAAAGACTTTAATCCTTCTGAAAGGCTCAA ACAAATATAACTTGGAAGTGTGCTATAATGAAAAGATTAGGAAAATTTTTTGGACAGATAGATGAAAGGGGAAGTTATGTTACCTTTTCAGTTGCCTCTT TTGCTATACAAAAATAACAATATACTTCTATGGTCGAGTAAAGTCTATTAAGGGTTTTAAGAGCCCTTTCATTTCATAGTTGATTATTTCCCATCTCAAT ATTATAACCATTTTGATATTTACTAACTTCCATTTTCACTTTTGCATGCAGTTGATGAGGTAGAAAGCCGCTGGAAATTCTGCTACAGCCTATCCATGAT TTAATCAGTGCCTTTAGAATTTCCTTTATGAAGTTCTTCAAACTGAGATTTACCTAGAAAAAAGATACCAGCATTTGGCACCTATATACTTTATAAAATA TTGTTTAACCTTTCATTAATTAAGAACTACTTTATATAAACTCCTAGCTAGTACATTTTATGTGTTTGATTGAACCTACTACTATAAAATATATGTTGAA ATATGCACTCAGCATTGATTTTTTTTTTTTTTTTTTTTATTATTTATTATTTTTTTTTCTTTTTTTTTTGTCTTATTCACTTTGTTTTTCTTTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_163621; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_419439
| Blastp | Agamous-like MADS-box protein AGL5 from Arabidopsis with 81.41% of identity |
|---|---|
| Blastx | Agamous-like MADS-box protein AGL5 from Arabidopsis with 81.41% of identity |
| Eggnog | Transcription factor(COG5068) |
| Kegg | Link to kegg annotations (AT2G42830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435313.1) |
| Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |