Ll_transcript_419424

• Id Trinity: TRINITY_DN48740_c1_g1_i7
• Name Transcript: Ll_transcript_419424
• Sequence: TGCATCCATTAATTCAGCTGAGTTTCAAGATAACACTAAAGGGCTAGAAATAATAGTGCTCATTGGAAGAGGTACAACTTATAAGCTAAGATACTTTCAG CCATGGAGTTTGATCCAAATATGGAAGCAGGAACAGAAGGGTGTTCTTCAAATCAGAAAAAAACTGGAAGAGGGAAAATAGAAATCAAAAGGATCGAGAA CACAACAAATAGACAAGTTACTTTCTGCAAGCGCCGAAATGGGTTGCTGAAGAAAGCATATGAACTATCAGTATTGTGTGATGCAGAAGTTGCTCTTGTT GTCTTCTCTAACCGTGGCCGTCTCTATGAATATGCCAACAACAGTGTTAGAGGAACTATCGAAAGGTACAAAAAAGCATCTGCTACTTCCACAAATGCAG AATCTGTATCTGAAGCTAATACACAGTTTTATCAGCAGGAGTCATCCAAATTAAAGAGACAAATCCGAGACATTCAGAATCTGAACAGGCACATTCTTGG TGAATCACTTAGCTCTCTGAGTCTCAAGGAACTAAAGAACCTTGAGAGTAGATTGGAGAAAGGTTTAAGCAGAGTTAGATCTAGAAAGCATGAAACTTTG TTTGCTGACGTCGAGTTCATGCAAAAGCGGGTACCCATCATTTCCTTTGATGTTATTAATTTTTGCTACTTTATCTTCAACAGAAATAATGAAAAAAAAA CAACAACACAAACTCCTCCAAATTTTGTTAAAATAGAATACTTACATGGGTATAATACCTCTTCTAACAAATGTATACTTAACACAATGTGCAGGAAGTT GAGCTGCAAAACCATAATAACTATCTGAGAGCTAAGGTATCTCTCATTACTTCCATAACTAACACACAGAGAGGTTAAGATATTAATGTGAAATGACATT AAATTTGAGTGTCATTAATTAGTAGAGTAAGATGAATAACAAGAGTATTGATGGATGGTGCAGATAGCTGAATATGAGAGAGCACAACAACAGCAACCAA ATATGATGCAGCAGGGAAATGTGTGTGAGACCATAGCATCACAACAATATGATAGGAACTTCTTCCCAGTAAATCTCCTAGATCCCAATCATCAATATTC ACGTCAAGACCACACTGCTCTCCAACTTGTGTAAGTACTGCCTAGCACATGCACCTCTCACTCTTACAATTTGTTGTTAAATTTGCAAAAACAACTCGGG AAATTAATGAGTGGTGCCTTAAGAAAAACATTGGTCTAAGAAAAACATGCATAATGAGTCATTCTAATTCTCAATTTTTTGCTTTGTAATGGTACTTATT AGATGGGTCCTATATAATATTAGGGCTATCTTTTACAAGCTCTGGAAAGACTTTAATCCTTCTGAAAGGCTCAAACAAATATAACTTGGAAGTGTGCTAT AATGAAAAGATTAGGAAAATTTTTTGGACAGATAGATGAAAGGGGAAGTTATGTTACCTTTTCAGTTGCCTCTTTTGCTATACAAAAATAACAATATACT TCTATGGTCGAGTAAAGTCTATTAAGGGTTTTAAGAGCCCTTTCATTTCATAGTTGATTATTTCCCATCTCAATATTATAACCATTTTGATATTTACTAA CTTCCATTTTCACTTTTGCATGCAGTTGATGAGGTAGAAAGCCGCTGGAAATTCTGCTACAGCCTATCCATGATTTAATCAGTGCCTTTAGAATTTCCTT TATGAAGTTCTTCAAACTGAGATTTACCTAGAAAAAAGATACCAGCATTTGGCACCTATATACTTTATAAAATATTGTTTAACCTTTCATTAATTAAGAA CTACTTTATATAAACTCCTAGCTAGTACATTTTATGTGTTTGATTGAACCTACTACTATAAAATATATGTTGAAATATGCACTCAGCATTGATTTTTTTT TTTTTTTTTTTTATTATTTATTATTTTTTTTTCTTTTTTTTTTGTCTTATTCACTTTGTTTTTCTTTTCT
• Tissue: pods
• Gene name: LI_gene_163621;
• Additional information: details;

Expression of Ll_transcript_419424

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.3
• PS2: 1
• PS3: 0.7
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419424

• Blastp: Agamous-like MADS-box protein AGL5 from Arabidopsis with 80% of identity
• Blastx: Agamous-like MADS-box protein AGL5 from Arabidopsis with 80% of identity
• Eggnog: Transcription factor(COG5068)
• Kegg: Link to kegg annotations (AT2G42830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435313.1)
• Pfam: SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;