Ll_transcript_419425

• Id Trinity: TRINITY_DN48740_c1_g1_i8
• Name Transcript: Ll_transcript_419425
• Sequence: AATTAAAGCTAAGATAGTGAGAGCTTTGTTTCCTTCTTTTTCTTATCTCCATATTTCATTATCATCTATATTCATGGCTAGTCCAGACTTAATAGCTTCT GTACATAATAATCAAGATCATCTGCTAAAACCAGCCATGGAGCTTGATCCGAGTAATATTGAAGGAGGAGGAACAGAAGGGTGTTCTTCTCATCAGAAGA CAACAGGAAGAGGGACAATAGAACTCAAGAGGATCGAAAACACAAAAAATAGACAAGTTACTTTCTGCAAACGCAGAAATGGGTTGCTGAAGAAAGCATA TGAACTATCAGTATTGTGTGATGCAGAAGTTGCTCTTGTTGTCTTCTCTAACCGTGGCCGTCTCTATGAATATGCCAACAACAGTGTTAGAGGAACTATC GAAAGGTACAAAAAAGCATCTGCTACTTCCACAAATGCAGAATCTGTATCTGAAGCTAATACACAGTTTTATCAGCAGGAGTCATCCAAATTAAAGAGAC AAATCCGAGACATTCAGAATCTGAACAGGCACATTCTTGGTGAATCACTTAGCTCTCTGAGTCTCAAGGAACTAAAGAACCTTGAGAGTAGATTGGAGAA AGGTTTAAGCAGAGTTAGATCTAGAAAGCATGAAACTTTGTTTGCTGACGTCGAGTTCATGCAAAAGCGGGAAGTTGAGCTGCAAAACCATAATAACTAT CTGAGAGCTAAGATAGCTGAATATGAGAGAGCA
• Tissue: pods
• Gene name: LI_gene_163621;
• Additional information: details;

Expression of Ll_transcript_419425

FPKM

• PAB: 1
• PNAB: 10.5
• PS1: 30.2
• PS2: 24.7
• PS3: 42.3
• PW1: 3.4
• PW2: 6.3
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419425

• Blastp: Agamous-like MADS-box protein AGL5 from Arabidopsis with 76.06% of identity
• Blastx: Agamous-like MADS-box protein AGL5 from Arabidopsis with 76.06% of identity
• Eggnog: Transcription factor(COG5068)
• Kegg: Link to kegg annotations (AT2G42830)
• CantataDB: Link to cantataDB annotations (CNT0001490)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461250.1)
• Pfam: SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;