Ll_transcript_419386

• Id Trinity: TRINITY_DN48747_c1_g1_i4
• Name Transcript: Ll_transcript_419386
• Sequence: ATTTGTTATCTGATTTTCTCTCTCTAAAACAAATTGAAAATTTGAGCACAATCACATGATATCATATATCTAATCCAAACGAAGAAAACCTCTATCCCTA TTCTTCTTCATCAATCACTCACAACACAATGAATAGCTTAACAACGAGCTTCTCAATTCGAATATGTAACTCTCGTTCTGACCTAATCCCTATACGACAC CGTTTCCTTCGTGAATTCATCAAAACACGTGTCACTCTTTTACCAACCAAATCACTTAGACCACATCCAAAGATTGTGTGCATGGCGGAACCTTATATGA TAACCAAGCTTGAATCAGCGGAGAAGACCTGGAAAGAATTATCGGTGAAGTTGGCTGATCCCGATGTCGTGTCTAATCCCAGCGAGTATCAAAAGTTGGC ACAATCTGTGTCTGAACTCGACGAGGTTGTGTCCACATACAAGAGTTTTAAAGAGTGCGAGAAGAACCTAGAAGAAACTAAAGCTTTAGCAAAGGATGAT GGAAATGATGAGGATATGGCCCAAATGATATCATATGAAATTGAATCTTTGTCAAGGCAACTGGAAGAGCTTGAGGGAAAGCTTAAGTTGTTACTGCTAC CCAGTGATCCTCTGGATGCAAGAAACATAATGCTTGAAGTACGAGCAGGTACTGGAGGTGACGAGGCTGGAATATGGGCTGGTGATCTTGTAGGTCCGAA TGTATGAAAAATATAGTGAACGGAGTTCTTGGAAATTCTCTCCTGTCTCATGCTCTGAGGCAGAAAAAGGAGGATACAAAACTTATGTGATGGAGATAAA AGGAAAACGTGTCTATAGTAAATTAAAATATGAATCTGGTGTCCACCGAGTTCAACGTGTTCCTCTAACAGAAACACAGGGTCGGGTACATACTTCTACT GCAACAGTTGCCATCATGCCAGAGGCTGATGAAGTTGAAGTTGAAATCGACCCAAAAGATATTGAGCTAACAACGGCACGTTCTGGGGGTGCAGGAGGCC AAAATGTTAATAAGGTGGAAACAGCCATTGATCTATTCCATAAACCAACTGGAATCCGTATCTTTTGTACTGAAGAAAGAACTCAACTTCAGAACAGACA TCGCGCTTTTCAGTTGCTCCGAGCAAAACTCTTAGAAATTAAGGTAAGGGAGCAGCAAGAGTCAATACGAAACCAGAGGAAATTACAGGTTGGTACAGGT GCACGGGCAGAGAAAATTCGGACATATAATTACAAGGACAATAGGGTAACTGATCACAGATTGAAGATGAACTTTGAGCTCACCTCTTTTCTTAACGGTG ACATAGAAAATGCTGTTCAGGTATATTATCTACCACTCCTCCTTTGGCACGAACTTGTTTTTCTCTCCTTTTGTCTCCCTGTGTCTGAATGTCGGCAATA TATGCTTAGAAAAGTGCTATATATAATCAATATAGGTGCACCTGCACACTTGTAAATGTTGCTTATCTAGGTATTATTAGATGAAGGCGGCTTAGTATTA TAGCTGAAATGATTTTGGTAAGCAAGGACCTGCTAGGAGAAAAAAAAATGAAGGTTTTAGAGAAACCCACAGTCATTGAAACTCTTGGGTTGGATTTGAT AATGCCGGCATTGCTGGGCAGAGGCAACGAGAAGGAAAATAGTAAGGTGCTGAATGATGTTGAATGGTAATGGTTTTCTAACCAAGATTAATACAAAAAA GGGTGGTACAATACACGAGTCTCCATCTTAGTGGAGTCTGATGAGGGTAAATGTACGTAGTCTTACCTCCGCAATCGGAGAGGCTGTTTCCAGGTTTAAC CAAGATTAATACAATTAAATAAAAAACATTTCTTAAATTATATAAAAAAACGCCTCAAGAGTGAAGAATGGGTAACTCCATGAATGTGAAGGCATGACTT TTGAAAAAAGAACAAAGTGAAAACACAAATAGCAAACCACAAGAAATCGTGTACTCTAGATGACTGAGTGCACTGATGCAGCTTAATAAAAAATGGTATA CTGGCAGTAATCTGCATGAATGGGCGAAAATGGTTTTTCGATAACACGACTTTGTATCACTGAAAATTATTCTTCTTGCAGTCTTGTGTTACAATGGAGC AAAAGGAGCTTCTGGAAGAACTTGCCGAATCTGTAGGAGCTCCTGCCCGTTGATATAGTGCAGATTTTGGTCATGTTATTGGAAATTTTTTGATGGACTA CTTTTGACAAATGTAATATCTGCTATTATGTTGTTGTTCTCATTAATGTGTCTCTTCATCTGAAGTTTGTAACATCTCTCTAGCTTATTGTTAATGTCTA TATGTGGAGCACTTTTACATGTAACATTTCACTAGACAGAACTTCATGTGTAAATTTCATAATGTAAAGTGATGCAATGAACATTTGCTTTTGATGGAAC TAGAAGTTTGTTATAAACAAAGCTAGAGAAGGATAATATTTTATTGGGGAAATGTTAACTTGGGGTATTGTTTAAGAAGGCAAAATAAGTATTTTTTCAT TTTTGCATTGGAATTCATGCATGTACCTTAAGTTAAAG
• Tissue: pods
• Gene name: LI_gene_163672;
• Additional information: details;

Expression of Ll_transcript_419386

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 0.2
• PS2: 0.2
• PS3: 0.3
• PW1: 0.3
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419386

• Blastp: Peptide chain release factor APG3, chloroplastic from Arabidopsis with 87.02% of identity
• Blastx: Peptide chain release factor APG3, chloroplastic from Arabidopsis with 87.14% of identity
• Eggnog: Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (By similarity)(COG0216)
• Kegg: Link to kegg annotations (AT3G62910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419205.1)
• Pfam: PCRF domain (PF03462.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;