Ll_transcript_419408

Id TrinityTRINITY_DN48747_c2_g2_i8
Name TranscriptLl_transcript_419408
SequenceTGACAACCACTTCACTAATCTGGAGTCGGCATTGGTTGCTCTTGGCTGCAAAGAGTGCATTCTGCCTATGACAAATCTGTCAAAAACAGAGTGTTGCGTG ATACATTGACTGAATGTCGTGTGATGTTAACTGAGAGGAAGGAAACTGAGTTCAGAATAACGGATCTAGCACAGGATCTTGGTAGTTTTGTTAAAGGTTC TCCTGAACCAGTATGAGATTTAGGGGGTGGATTTGAATTTGCACCAAACATGACTCAGGTGAGTTCCATTAGTTTTTTAATCCTCATGTTATTTTTATTG GGGGTATAGCTAATACTATCTATGCAGCACTAAGACTGCAAAGAATTATTTCCATATTGCGTCTCACATGTATTGTTCATGGATGATAGAAGCTTTTTAG ATAGTATTCATCCATATTTTCATTTATGTGTTTTTTTCATCATCAACATATATGTTGTGTACATATCTTATATATATACGCATGTTTCCTAGGTTCTTAT CTTATCTTTTTGTCATATTTATACGCATTCTTAAACATGTTGTATCCTATATCTTGTTACTATTTATTCGATCTTTTTTCCGTTACTGCAGATGGCAGAC CCTCTCACTGCACTGGTGTATGTAGTTCAAGTGATGAACTTCTTGAAGACATTTATAACAAGAACATTGGAGGAAAGAATAAAACAAGGTGCTGCTGCAG AAAGTGGAGAGGCTGAGGAACACATAGTTGCTAAGGAAACTGCCTTAGATAATAACTCCTCAATTGGAGGAGAAATTTGGTCTATCAATTCGAACGTGAC ATGGTAGAAGTGAGATTGAAGAAAGCTTTCAGTCCAAGAGTGTGGATTTTTGGTTAGGGAAAACTGTGCATTTTGAGAGGATAGTGATAAGTTGTGATGG TTATTTTTTTGCTAATATGAGAATGATGCTTGGTTTGTGCTTGTTTATATAAACCTTGGGACAATTTACTTGTTGGCTGTTGAGAATTGAGATGGTGACG CATTTTGTGAATTCATCATTTGTAGGACATTTTTGGAATGTTTCAATGTAGGTGCATCTAGAATTAGCTAGGGATTCTCAGAATGATTATCATATGATAC TCTTAATCAATAAAAAAAAGATGGTGATATTATGTTTCCATTAATTAAAAAAATTCAATTCAAT BLAST
Tissuepods
Gene nameLI_gene_163674; 
Additional information-

Expression of Ll_transcript_419408

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_419408
Blastp-
BlastxDNA mismatch repair protein MSH2 from Zea with 46.55% of identity
Eggnogthat it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)(COG0249)
KeggLink to kegg annotations (100279876)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_003549805.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;