Ll_transcript_420656

• Id Trinity: TRINITY_DN48748_c5_g1_i1
• Name Transcript: Ll_transcript_420656
• Sequence: ATCAAAATTCATATCCTGTGCATTGGGAAAGAGAATCACAACACTGTTTTCTGTACAAACATCTTGGAAAAGAAAAATGTTAGCGACGATTATTAGATAC AATTCCCACGATACCACAAAATTCATCTTTATCCAATAACAACACTTTTCTTTATCAAAACTCTTCTTCTTTCTTCACTGCCAATGGCGTCAATACTTTC TCTCACTCCTCACTTTTCAAACCCACCCCATCATCCCAAAAATCTTTCCCCTTTTTCACTTTCTCTCTCTCCTCAAGGTAGCTTGCTACACATCACCAGG AATCATGCAAATGCATCACGACTATCTATTTGTCTCAAAGACGAGTTTTGTAGACCTCATTACAGTTACAAATTGTATGTTCAAAATAAATTCCCCAGAG ATATAGTTGTGAGATCTGAACTTGCTGCAACTGGGGCTGCAGGAGATGGATATGCATTATCTGAACTGAAAATTGGGTCACAAGTCAGGGGCGCATGTTT TTATACTGTTACTGCCATTAATGCCTTGGTTCTTTTTGTATTGATGCTGGTTGGACATCCACTTGTACTTCTGTTTGATCGTTACCGAAGAAAATTCCAT CATTTTGTTGCTAAAGTCTGGGCAGCATTGACCGTCGCTCCGTTTTTCAACATCAAGATTGAGGGGTTAGAGAACCTTCCACCTCCCGATACTCCTGCTG TGTATGTGTCCAATCATCAGAGTTTTCTAGACATATACACTCTTCTTACTCTCGGAAGAACCTTTAAATTCATAAGCAAGACTGGGATATTCCTCTACCC AGTAATTGGGTGGGCAATGTTTCTTTTGGGAGCCATTCCTTTAAAGCGCATGGACAAACGAAGCCAGCTGGACTGTCTTAAACGGTGCATGGATCTTATC AAGAAAGGAGCCTCTGTTTTTTTCTTTCCAGAGGGAACACGCAGTAAAGATGGAAAGCTAGGCACTTTCAAGAAGGGTGCTTTCAGTGTTGCCGCGAAGA TGAATGCACCGGTCGTACCTATTACCCTCATTGGAACTGGCCAAATCATGCCTGCAGGAAAGGAGGGTATCGTGAACTTCGGTTCAGTGAAAGTTGTTAT ACATAAGCCTATTGAAGGAAACGATGCTAACATGTTATGCAACGAAGCTAGTAAGACAATAGCAAGTGCTCTGACTCAAACCTGAGAAATGTTCTGCAAA ATAGTTCCTTTAATTTCCATTACATGATGAGACTCAAAACCCATGTGCCTTGAAGTCAATAGGAAAGGTATGAATCAGATACATACATTTTACCTGTTTA GGGACCATTAGTACCCCTATGAAGCCCGATACTTAATACGACACGTCACAGATACGAGGATACGAGAATTTTGTTTTAAAATTCCGAGGTTGAGTAACTG TACAGAATTATGTGGGTTTGATCAAAATGAGCATAAGAATATGCAAAATAGAATGAATTTGTAGGTGTAAGTGGATGATGTTAATACTTCATACTTGTTT TAGGCTTTTATTAGGAAATTGGTACTTATGAAATCATTTACACGATGCACGACGCTTTGGTTCAAGTGTTACATGTTTGATTCCCCTTAAACAAGGTCTC GGGTTTGAGTCTTGTGAATGGAAAAAATACATGCTGGGAGAGTTAGACCCACATACATGTTGATGTTCTCAACTTGGACATGATTGCCTCCAGTGCGAAG ATACTTGTAGAAAACCAAAAAAATTTACATGGTGCACGTTTTTGCAAGAGAATGTTGATTAAGTATTATAATATCTACAGTTATGCTAGCCATGTATAAC CAATCTTATGCCAAATTTGACTAAAAGCTTAGCAGTTTTTTAATATCTATAGTTGATAATATTTATAGTTGTTAATGCTCTATATACTAAATTGTATGTG TAGCAAAACTTTAACCACAACTATGTGAATGTGTTTTGAAGTTTATCATTCACTAAAAAGGAATATTCTCTGGGAAGTTGTAAAACTAATGCTGCTAAAG CTAAGTGTAGGATTAATATAGTGATGCATAGTTCCAAAGGGATTCAAGGTTATTGTGATTTTAAAAAGATTAATGCTC
• Tissue: pods
• Gene name: LI_gene_163683;
• Additional information: details;

Expression of Ll_transcript_420656

FPKM

• PAB: 5.7
• PNAB: 6
• PS1: 6
• PS2: 3.1
• PS3: 4.3
• PW1: 5.9
• PW2: 6.1
• PW3: 6.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420656

• Blastp: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic from Brassica with 64.53% of identity
• Blastx: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic from Brassica with 64.53% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (106441094)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417020.1)
• Pfam: Acyltransferase (PF01553.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;