| Id Trinity | TRINITY_DN48749_c1_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_421485 |
| Sequence | CTAGTATTCAATTTTGACTTCATCCTTCGCAAATGAAACTAATTGGGATAACTATCGCGACTCGATTTTCGGTTGAACATCGGAAACACCACTGATAGAA GTATAGGTAAGGTATGCTAAAAGCAGTTGGTGGCTTTCCCCGTCTCCCATCTCTCACTTTCGCCAAATATATGCTATCCAAACCAACCCAATTATACAAC ATGACCTCTTCTTCTGTGCCATCGCTCACATATCCAAAATTCGTTTCCGTAGAAGGCGCCGATATACACTCCCGAACTAAACCAGATGGCTTCAGATTCA CTCTCGTCTCTTATAACATTTTGGCTCAGGCTTATGTGAAGAGCTGTTTGTTCCCGCACTCTCCTTCTCCGTCTCTTAAGTAAACTTTATTTGCATCATC ATGTTTCAAATTAATTAATCATTACCAGAAATATGCATCACTAACTTCATTTTAACATCACTGGTTTTGTTCACTGAAGGTGGAAATTTCGTTCAAATGC TGTTTTACAAGTTCTCAGCAACTTGGCAGCTGATTTTTTCTGCCTACAGGAAGTTGATGAGTTTGATAGCTTTTACAAAGGAAAAATGGAGGAGCTAGGA TATTCTTCTATTTATATGAAGAGAAGTGGACAGAGAAAACGTGATGGCTGTGGTTTATTTTACAAGCATGACCGGTATGTTGGACTTCTGTGCAAAAATC AAACAATTTTTCGGTTTTGTGGATATCGTTTTATAATGTAAATTTGCTCGGAGTTACATGATCAATATAATTAGTCACTGACTAGGGATTTGAATTTGGA CCTAGATATAAGATTTCTATTGGAGCAAGAGAAAACTAGGATTTTAACTTAAGACTTGCAATCCCATGGCTTCTTATTTAATATTTTTCCGATGTAAATG TTGGTTAATAAACATAAGGATATATTCAAAAGTCCCAATGTAATTATGTGGGAATTGAAACCAGCAATAATGGCACTTTTGCTTGCTATTGGTCAATTAG TATTCAAACCAACTATGATTCTCTAGTTCTCTTTATATTTCTTTGCTCTTGCCTTTCCCATCGCATATTGGGATTATTTCTTGTTATGTTTTTATGCTTC CTCAAAACTATGGAATAGATCTGGTTAAAACTTCATGGATGATCTTTTGGTCTATAATAATGTCAATGTTCAATAATCTTAATCTGCATTTATACTTTTT GCTATTTAGTGCTGAGTTGGTCTTAGAGGATAAAATAGAATACAATGATCTTGTAAAGTCAATTCAAGACGAGAACTCTCCAAATGATGATGAAAACAGC AATATCCAGACAGTCCGGCCTGATAAACAAAAGGATGTTGCATCCAAAAGTGGTAAGTGCAAATTAAAACCAAACAATTCCTTTTGATTTTGCCACATCT TGAACATGATAGTACTTTGATATTGTTATAGACTTGCAAATAAACGGGTGGAACCAAAACTTTCTTTCTGCTACTTCATTTCTATTGTATATATATATAT ATATATAGTGATGATTTTTAGTTTTTTTCGTTTATCTATTGTCTATTAGTTGCTTCAGTGTAGAAAGTTAGAAGTTGCAGTTACATGCTTTATGACTGTA CAGACTTCAGTGTACCCTTTCTTCGTTGATTGATTTTCTGATCCAGGACCTAAATCGAATACAGAAGATCGTGGAGATCCCAATGATCCTCGTGTGAGAC TAAAGCGTGACTGTGTTGGACTTTTGGCTGCATTCAAACTCAAAGATCCCTCTCGTCATGTTGTTATTGTGGCCAACACACATCTTTACTGGTATAGAAG TAGCTTTATATGTTGCTTTATTTCTTTTTTCGTGTGTTGATTTTTGATGAAAAGTTGACTTAATGTGGATGACTTCTGTGGACCTGATTTTGCTTAACTT CAGTGGTTGATTTTATAAATGACTCTTGACTTTCTGCCCAAGGGATCCTGAGCTTGCTGATGTCAAGCTTGCACAAGCGGAATATCTTCTATCTCGCTTG GCACAATTTAGAACACTGGTATCAGATAGATATGAATGCATACCTGAAGTCATTGTAGCTGGTGACTTCAATTCTCAGCCAGGAGATATGGTACCTAAGC ACTTCTAAAACCTTATTTCACATATTTTTCCCCTTTGTCTATACTCTATTACCACTGTGCATTTCATGTTCACATCTTTCCTGACTCTGGTCTTAGTTCT TCAAGTTATGTGTTAGATCAAGGTTATTTATGTAGAAGTTAGTTTTATTGCACCGATGTCCTGCATGTGCATAAATCTGGTATTCATGCATAAGGTAATT CTCAATCTCAAAAGAAAAGGGGAAGAGTGACATGAAGATAGTTGCTAGGAACGGGAAATCACAAAAATGTCGCTGTTGATCTCAAAGGTGAATGCTACCG ACCCACCCCCTTTCTTGGGAAGAATGGTCTAGAGCCTTTTTCTAAATGAATATAATATTAAAATAACAATCAAGCCTTAATCTCACTAGGTGAGATTGAC TACATGAATATAATATTAACCAAACCGAGCTAATAATCTCGAAGTTCAAATTCTATGAATTTGACCAAAGATCTTGTACACAATTGAGTGTTGATCAGAA TCAATAGAAAACTTCTTTTCCCAAAGAGAAAATATAGAATCTGTGTTTATATTTATCCAAACCAATTTAACCCGTTCAAAGATATTTGTAGAATGTAAAC AATAGAAGTTTTTGGGATCTTCTAGTCTGAACAAAGAATAAACAATGCAATACCATGACAAATTTGTATTACTGTTTCTCTCTGGCTGTGTCCATTTGTT CATCCATATTGGTTTTAGTCATGCTTGAGCATTTGTTCATTGATTTAGATGTGGTTCAAGAATATGAGCTATTTGCTGCAATATTTTACTAATCTATTTA ATCTTCCATTTTTTCACAGGTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_163692; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_421485
| Blastp | - |
|---|---|
| Blastx | Carbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 69.84% of identity |
| Eggnog | Ccr4-NOT transcription complex, subunit(COG5239) |
| Kegg | Link to kegg annotations (AT1G31500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003612546.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |