| Id Trinity | TRINITY_DN48749_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_421490 |
| Sequence | CTAGTATTCAATTTTGACTTCATCCTTCGCAAATGAAACTAATTGGGATAACTATCGCGACTCGATTTTCGGTTGAACATCGGAAACACCACTGATAGAA GTATAGGTAAGGTATGCTAAAAGCAGTTGGTGGCTTTCCCCGTCTCCCATCTCTCACTTTCGCCAAATATATGCTATCCAAACCAACCCAATTATACAAC ATGACCTCTTCTTCTGTGCCATCGCTCACATATCCAAAATTCGTTTCCGTAGAAGGCGCCGATATACACTCCCGAACTAAACCAGATGGCTTCAGATTCA CTCTCGTCTCTTATAACATTTTGGCTCAGGCTTATGTGAAGAGCTGTTTGTTCCCGCACTCTCCTTCTCCGTCTCTTAAGTGGAAATTTCGTTCAAATGC TGTTTTACAAGTTCTCAGCAACTTGGCAGCTGATTTTTTCTGCCTACAGGAAGTTGATGAGTTTGATAGCTTTTACAAAGGAAAAATGGAGGAGCTAGGA TATTCTTCTATTTATATGAAGAGAAGTGGACAGAGAAAACGTGATGGCTGTGGTTTATTTTACAAGCATGACCGTGCTGAGTTGGTCTTAGAGGATAAAA TAGAATACAATGATCTTGTAAAGTCAATTCAAGACGAGAACTCTCCAAATGATGATGAAAACAGCAATATCCAGACAGTCCGGCCTGATAAACAAAAGGA TGTTGCATCCAAAAGTGGACCTAAATCGAATACAGAAGATCGTGGAGATCCCAATGATCCTCGTGTGAGACTAAAGCGTGACTGTGTTGGACTTTTGGCT GCATTCAAACTCAAAGATCCCTCTCGTCATGTTGTTATTGTGGCCAACACACATCTTTACTGGTATAGAAGTAGCTTTATATGTTGCTTTATTTCTTTTT TCGTGTGTTGATTTTTGATGAAAAGTTGACTTAATGTGGATGACTTCTGTGGACCTGATTTTGCTTAACTTCAGTGGTTGATTTTATAAATGACTCTTGA CTTTCTGCCCAAGGGATCCTGAGCTTGCTGATGTCAAGCTTGCACAAGCGGAATATCTTCTATCTCGCTTGGCACAATTTAGAACACTGGTATCAGATAG ATATGAATGCATACCTGAAGTCATTGTAGCTGGTGACTTCAATTCTCAGCCAGGAGATATGGTACCTAAGCACTTCTAAAACCTTATTTCACATATTTTT CCCCTTTGTCTATACTCTATTACCACTGTGCATTTCATGTTCACATCTTTCCTGACTCTGGTCTTAGTTCTTCAAGTTATGTGTTAGATCAAGGTTATTT ATGTAGAAGTTAGTTTTATTGCACCGATGTCCTGCATGTGCATAAATCTGGTATTCATGCATAAGGTAATTCTCAATCTCAAAAGAAAAGGGGAAGAGTG ACATGAAGATAGTTGCTAGGAACGGGAAATCACAAAAATGTCGCTGTTGATCTCAAAGGTGAATGCTACCGACCCACCCCCTTTCTTGGGAAGAATGGTC TAGAGCCTTTTTCTAAATGAATATAATATTAAAATAACAATCAAGCCTTAATCTCACTAGGTGAGATTGACTACATGAATATAATATTAACCAAACCGAG CTAATAATCTCGAAGTTCAAATTCTATGAATTTGACCAAAGATCTTGTACACAATTGAGTGTTGATCAGAATCAATAGAAAACTTCTTTTCCCAAAGAGA AAATATAGAATCTGTGTTTATATTTATCCAAACCAATTTAACCCGTTCAAAGATATTTGTAGAATGTAAACAATAGAAGTTTTTGGGATCTTCTAGTCTG AACAAAGAATAAACAATGCAATACCATGACAAATTTGTATTACTGTTTCTCTCTGGCTGTGTCCATTTGTTCATCCATATTGGTTTTAGTCATGCTTGAG CATTTGTTCATTGATTTAGATGTGGTTCAAGAATATGAGCTATTTGCTGCAATATTTTACTAATCTATTTAATCTTCCATTTTTTCACAGGTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_163692; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_421490
| Blastp | Carbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 48.38% of identity |
|---|---|
| Blastx | Carbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 52.67% of identity |
| Eggnog | Ccr4-NOT transcription complex, subunit(COG5239) |
| Kegg | Link to kegg annotations (AT1G31500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423636.1) |
| Pfam | Endonuclease/Exonuclease/phosphatase family (PF03372.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |