Ll_transcript_421502

• Id Trinity: TRINITY_DN48749_c1_g1_i17
• Name Transcript: Ll_transcript_421502
• Sequence: CTAGTATTCAATTTTGACTTCATCCTTCGCAAATGAAACTAATTGGGATAACTATCGCGACTCGATTTTCGGTTGAACATCGGAAACACCACTGATAGAA GTATAGGTAAGGTATGCTAAAAGCAGTTGGTGGCTTTCCCCGTCTCCCATCTCTCACTTTCGCCAAATATATGCTATCCAAACCAACCCAATTATACAAC ATGACCTCTTCTTCTGTGCCATCGCTCACATATCCAAAATTCGTTTCCGTAGAAGGCGCCGATATACACTCCCGAACTAAACCAGATGGCTTCAGATTCA CTCTCGTCTCTTATAACATTTTGGCTCAGGCTTATGTGAAGAGCTGTTTGTTCCCGCACTCTCCTTCTCCGTCTCTTAAGTAAACTTTATTTGCATCATC ATGTTTCAAATTAATTAATCATTACCAGAAATATGCATCACTAACTTCATTTTAACATCACTGGTTTTGTTCACTGAAGGTGGAAATTTCGTTCAAATGC TGTTTTACAAGTTCTCAGCAACTTGGCAGCTGATTTTTTCTGCCTACAGGAAGTTGATGAGTTTGATAGCTTTTACAAAGGAAAAATGGAGGAGCTAGGA TATTCTTCTATTTATATGAAGAGAAGTGGACAGAGAAAACGTGATGGCTGTGGTTTATTTTACAAGCATGACCGGTATGTTGGACTTCTGTGCAAAAATC AAACAATTTTTCGGTTTTGTGGATATCGTTTTATAATGTAAATTTGCTCGGAGTTACATGATCAATATAATTAGTCACTGACTAGGGATTTGAATTTGGA CCTAGATATAAGATTTCTATTGGAGCAAGAGAAAACTAGGATTTTAACTTAAGACTTGCAATCCCATGGCTTCTTATTTAATATTTTTCCGATGTAAATG TTGGTTAATAAACATAAGGATATATTCAAAAGTCCCAATGTAATTATGTGGGAATTGAAACCAGCAATAATGGCACTTTTGCTTGCTATTGGTCAATTAG TATTCAAACCAACTATGATTCTCTAGTTCTCTTTATATTTCTTTGCTCTTGCCTTTCCCATCGCATATTGGGATTATTTCTTGTTATGTTTTTATGCTTC CTCAAAACTATGGAATAGATCTGGTTAAAACTTCATGGATGATCTTTTGGTCTATAATAATGTCAATGTTCAATAATCTTAATCTGCATTTATACTTTTT GCTATTTAGTGCTGAGTTGGTCTTAGAGGATAAAATAGAATACAATGATCTTGTAAAGTCAATTCAAGACGAGAACTCTCCAAATGATGATGAAAACAGC AATATCCAGACAGTCCGGCCTGATAAACAAAAGGATGTTGCATCCAAAAGTGGACCTAAATCGAATACAGAAGATCGTGGAGATCCCAATGATCCTCGTG TGAGACTAAAGCGTGACTGTGTTGGACTTTTGGCTGCATTCAAACTCAAAGATCCCTCTCGTCATGTTGTTATTGTGGCCAACACACATCTTTACTGGTA TAGAAGTAGCTTTATATGTTGCTTTATTTCTTTTTTCGTGTGTTGATTTTTGATGAAAAGTTGACTTAATGTGGATGACTTCTGTGGACCTGATTTTGCT TAACTTCAGTGGTTGATTTTATAAATGACTCTTGACTTTCTGCCCAAGGGATCCTGAGCTTGCTGATGTCAAGCTTGCACAAGCGGAATATCTTCTATCT CGCTTGGCACAATTTAGAACACTGGTATCAGATAGATATGAATGCATACCTGAAGTCATTGTAGCTGGTGACTTCAATTCTCAGCCAGGAGATATGGTTT ATCAGTACCTAACATCAGGCGATCCTTCGTCGAGAGGGGTGACTGAATGCTTAGAGGAGCCTCCTATTCCCTTATGTAGTGTCTATGCTTCTACTAGAGG AGAGCCACCATTTACAAACTACACACCTGGCTTCACTGGAACGCTCGATTATGTATTGTTTTGCCCTTCTGACCACATTAAACCAATTAGTTTTCTCAAG CTTCCAGACTCTAATGATGCTGATATTGCTGGTGGACTACCAAACTACAGTCATCCGAGTGATCATCTTCCGATCGGCGCTGAATTTGAAATCATCAAGG AATAAATATTCTTGATTGCCAACTGGTATTTGACTTCTCAAGTTTTGATGTTCCATCCCTTTTTAGCTTCTGTAAAATGAGAGCAAGCTACCATAACTTA TGTCATCAAATCAACACAGGACATGGCAAAAAGGTGAAACAGTTACCGAAAAGCAGACATTTATCAAGTAGGTTTTGTTTTATGATGAAAAGTTCATACG TTTGACTTCTTGTCCCCTTGAAAAGTTGCAGACAATGTACTCTGTTATACATTATTTTTAGAGAAATTTTTTTAGAGCAAGTAAATGTTTATTTATTTCG AAGGAAAATCTGGGGAAAAATCTATGCCAAATTTCTGTAGTTGTCAATTTTACTTGTCAGAAAAGATCTGCTTTTCTTGGCCATTATCATCCACTGGCTT TTCTTGGTCGCAAGCTCTAAAGCTGTGTAGGTGGGCCAGAGATTTGATGATAATCATAACAGTGATCTTTTTGGATGGCCCTTGGGTAACTATCAATTGT TTAATAAAAACCAATTAATTCAAGGAGCCAATCAATGTTCATTGCTAGTACATTTTGTCATAGTATACATATTATTATCCCTCACCTGCTCTTACCAGAA TGCACTGCATGATGGGTGATTATAAAGTATGTAAAAGGGTATGGGGAAAGTGATGTAAGGATATCATTGCTCATTTTCCTATACGCTAACAAATTCTAAG TATTCCTCCG
• Tissue: pods
• Gene name: LI_gene_163692;
• Additional information: details;

Expression of Ll_transcript_421502

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.4
• PS3: 0.4
• PW1: 0.2
• PW2: 0
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_421502

• Blastp: Carbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 50% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 65.97% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT1G31500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423637.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;