Ll_transcript_421507

• Id Trinity: TRINITY_DN48749_c1_g1_i20
• Name Transcript: Ll_transcript_421507
• Sequence: CTAGTATTCAATTTTGACTTCATCCTTCGCAAATGAAACTAATTGGGATAACTATCGCGACTCGATTTTCGGTTGAACATCGGAAACACCACTGATAGAA GTATAGGTAAGGTATGCTAAAAGCAGTTGGTGGCTTTCCCCGTCTCCCATCTCTCACTTTCGCCAAATATATGCTATCCAAACCAACCCAATTATACAAC ATGACCTCTTCTTCTGTGCCATCGCTCACATATCCAAAATTCGTTTCCGTAGAAGGCGCCGATATACACTCCCGAACTAAACCAGATGGCTTCAGATTCA CTCTCGTCTCTTATAACATTTTGGCTCAGGCTTATGTGAAGAGCTGTTTGTTCCCGCACTCTCCTTCTCCGTCTCTTAAGTGGAAATTTCGTTCAAATGC TGTTTTACAAGTTCTCAGCAACTTGGCAGCTGATTTTTTCTGCCTACAGGAAGTTGATGAGTTTGATAGCTTTTACAAAGGAAAAATGGAGGAGCTAGGA TATTCTTCTATTTATATGAAGAGAAGTGGACAGAGAAAACGTGATGGCTGTGGTTTATTTTACAAGCATGACCGTGCTGAGTTGGTCTTAGAGGATAAAA TAGAATACAATGATCTTGTAAAGTCAATTCAAGACGAGAACTCTCCAAATGATGATGAAAACAGCAATATCCAGACAGTCCGGCCTGATAAACAAAAGGA TGTTGCATCCAAAAGTGGACCTAAATCGAATACAGAAGATCGTGGAGATCCCAATGATCCTCGTGTGAGACTAAAGCGTGACTGTGTTGGACTTTTGGCT GCATTCAAACTCAAAGATCCCTCTCGTCATGTTGTTATTGTGGCCAACACACATCTTTACTGGGATCCTGAGCTTGCTGATGTCAAGCTTGCACAAGCGG AATATCTTCTATCTCGCTTGGCACAATTTAGAACACTGGTATCAGATAGATATGAATGCATACCTGAAGTCATTGTAGCTGGTGACTTCAATTCTCAGCC AGGAGATATGGTTTATCAGTACCTAACATCAGGCGATCCTTCGTCGAGAGGGGTGACTGAATGCTTAGAGGAGCCTCCTATTCCCTTATGTAGTGTCTAT GCTTCTACTAGAGGAGAGCCACCATTTACAAACTACACACCTGGCTTCACTGGAACGCTCGATTATGTATTGTTTTGCCCTTCTGACCACATTAAACCAA TTAGTTTTCTCAAGCTTCCAGACTCTAATGATGCTGATATTGCTGGTGGACTACCAAACTACAGTCATCCGAGTGATCATCTTCCGATCGGCGCTGAATT TGAAATCATCAAGGAATAAATATTCTTGATTGCCAACTGGTATTTGACTTCTCAAGTTTTGATGTTCCATCCCTTTTTAGCTTCTGTAAAATGAGAGCAA GCTACCATAACTTATGTCATCAAATCAACACAGGACATGGCAAAAAGGTGAAACAGTTACCGAAAAGCAGACATTTATCAAGTAGGTTTTGTTTTATGAT GAAAAGTTCATACGTTTGACTTCTTGTCCCCTTGAAAAGTTGCAGACAATGTACTCTGTTATACATTATTTTTAGAGAAATTTTTTTAGAGCAAGTAAAT GTTTATTTATTTCGAAGGAAAATCTGGGGAAAAATCTATGCCAAATTTCTGTAGTTGTCAATTTTACTTGTCAGAAAAGATCTGCTTTTCTTGGCCATTA TCATCCACTGGCTTTTCTTGGTCGCAAGCTCTAAAGCTGTGTAGGTGGGCCAGAGATTTGATGATAATCATAACAGTGATCTTTTTGGATGGCCCTTGGG TAACTATCAATTGTTTAATAAAAACCAATTAATTCAAGGAGCCAATCAATGTTCATTGCTAGTACATTTTGTCATAGTATACATATTATTATCCCTCACC TGCTCTTACCAGAATGCACTGCATGATGGGTGATTATAAAGTATGTAAAAGGGTATGGGGAAAGTGATGTAAGGATATCATTGCTCATTTTCCTATACGC TAACAAATTCTAAGTATTCCTCCG
• Tissue: pods
• Gene name: LI_gene_163692;
• Additional information: details;

Expression of Ll_transcript_421507

FPKM

• PAB: 2.5
• PNAB: 7.6
• PS1: 6.4
• PS2: 3.9
• PS3: 5
• PW1: 6
• PW2: 5.2
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_421507

• Blastp: Carbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 57.87% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 57.62% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT1G31500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423636.1)
• Pfam: Endonuclease/Exonuclease/phosphatase family (PF03372.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;