Ll_transcript_421471

Id TrinityTRINITY_DN48749_c1_g1_i4
Name TranscriptLl_transcript_421471
SequenceCTAGTATTCAATTTTGACTTCATCCTTCGCAAATGAAACTAATTGGGATAACTATCGCGACTCGATTTTCGGTTGAACATCGGAAACACCACTGATAGAA GTATAGGTAAGGTATGCTAAAAGCAGTTGGTGGCTTTCCCCGTCTCCCATCTCTCACTTTCGCCAAATATATGCTATCCAAACCAACCCAATTATACAAC ATGACCTCTTCTTCTGTGCCATCGCTCACATATCCAAAATTCGTTTCCGTAGAAGGCGCCGATATACACTCCCGAACTAAACCAGATGGCTTCAGATTCA CTCTCGTCTCTTATAACATTTTGGCTCAGGCTTATGTGAAGAGCTGTTTGTTCCCGCACTCTCCTTCTCCGTCTCTTAAGTGGAAATTTCGTTCAAATGC TGTTTTACAAGTTCTCAGCAACTTGGCAGCTGATTTTTTCTGCCTACAGGAAGTTGATGAGTTTGATAGCTTTTACAAAGGAAAAATGGAGGAGCTAGGA TATTCTTCTATTTATATGAAGAGAAGTGGACAGAGAAAACGTGATGGCTGTGGTTTATTTTACAAGCATGACCGTGCTGAGTTGGTCTTAGAGGATAAAA TAGAATACAATGATCTTGTAAAGTCAATTCAAGACGAGAACTCTCCAAATGATGATGAAAACAGCAATATCCAGACAGTCCGGCCTGATAAACAAAAGGA TGTTGCATCCAAAAGTGGTAAGTGCAAATTAAAACCAAACAATTCCTTTTGATTTTGCCACATCTTGAACATGATAGTACTTTGATATTGTTATAGACTT GCAAATAAACGGGTGGAACCAAAACTTTCTTTCTGCTACTTCATTTCTATTGTATATATATATATATATATAGTGATGATTTTTAGTTTTTTTCGTTTAT CTATTGTCTATTAGTTGCTTCAGTGTAGAAAGTTAGAAGTTGCAGTTACATGCTTTATGACTGTACAGACTTCAGTGTACCCTTTCTTCGTTGATTGATT TTCTGATCCAGGACCTAAATCGAATACAGAAGATCGTGGAGATCCCAATGATCCTCGTGTGAGACTAAAGCGTGACTGTGTTGGACTTTTGGCTGCATTC AAACTCAAAGATCCCTCTCGTCATGTTGTTATTGTGGCCAACACACATCTTTACTGGGATCCTGAGCTTGCTGATGTCAAGCTTGCACAAGCGGAATATC TTCTATCTCGCTTGGCACAATTTAGAACACTGGTATCAGATAGATATGAATGCATACCTGAAGTCATTGTAGCTGGTGACTTCAATTCTCAGCCAGGAGA TATGGTTTATCAGTACCTAACATCAGGCGATCCTTCGTCGAGAGGGGTGACTGAATGCTTAGAGGAGCCTCCTATTCCCTTATGTAGTGTCTATGCTTCT ACTAGAGGAGAGCCACCATTTACAAACTACACACCTGGCTTCACTGGAACGCTCGATTATGTATTGTTTTGCCCTTCTGACCACATTAAACCAATTAGTT TTCTCAAGCTTCCAGACTCTAATGATGCTGATATTGCTGGTGGACTACCAAACTACAGTCATCCGAGTGATCATCTTCCGATCGGCGCTGAATTTGAAAT CATCAAGGAATAAATATTCTTGATTGCCAACTGGTATTTGACTTCTCAAGTTTTGATGTTCCATCCCTTTTTAGCTTCTGTAAAATGAGAGCAAGCTACC ATAACTTATGTCATCAAATCAACACAGGACATGGCAAAAAGGTGAAACAGTTACCGAAAAGCAGACATTTATCAAGTAGGTTTTGTTTTATGATGAAAAG TTCATACGTTTGACTTCTTGTCCCCTTGAAAAGTTGCAGACAATGTACTCTGTTATACATTATTTTTAGAGAAATTTTTTTAGAGCAAGTAAATGTTTAT TTATTTCGAAGGAAAATCTGGGGAAAAATCTATGCCAAATTTCTGTAGTTGTCAATTTTACTTGTCAGAAAAGATCTGCTTTTCTTGGCCATTATCATCC ACTGGCTTTTCTTGGTCGCAAGCTCTAAAGCTGTGTAGGTGGGCCAGAGATTTGATGATAATCATAACAGTGATCTTTTTGGATGGCCCTTGGGTAACTA TCAATTGTTTAATAAAAACCAATTAATTCAAGGAGCCAATCAATGTTCATTGCTAGTACATTTTGTCATAGTATACATATTATTATCCCTCACCTGCTCT TACCAGAATGCACTGCATGATGGGTGATTATAAAGTATGTAAAAGGGTATGGGGAAAGTGATGTAAGGATATCATTGCTCATTTTCCTATACGCTAACAA ATTCTAAGTATTCCTCCG BLAST
Tissuepods
Gene nameLI_gene_163692; 
Additional informationdetails; 

Expression of Ll_transcript_421471

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_421471
BlastpCarbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 45.74% of identity
BlastxCarbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 65.45% of identity
EggnogCcr4-NOT transcription complex, subunit(COG5239)
KeggLink to kegg annotations (AT1G31500)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019423636.1)
PfamEndonuclease/Exonuclease/phosphatase family (PF03372.22)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;