Ll_transcript_421476

• Id Trinity: TRINITY_DN48749_c1_g1_i7
• Name Transcript: Ll_transcript_421476
• Sequence: CTAGTATTCAATTTTGACTTCATCCTTCGCAAATGAAACTAATTGGGATAACTATCGCGACTCGATTTTCGGTTGAACATCGGAAACACCACTGATAGAA GTATAGGTAAGGTATGCTAAAAGCAGTTGGTGGCTTTCCCCGTCTCCCATCTCTCACTTTCGCCAAATATATGCTATCCAAACCAACCCAATTATACAAC ATGACCTCTTCTTCTGTGCCATCGCTCACATATCCAAAATTCGTTTCCGTAGAAGGCGCCGATATACACTCCCGAACTAAACCAGATGGCTTCAGATTCA CTCTCGTCTCTTATAACATTTTGGCTCAGGCTTATGTGAAGAGCTGTTTGTTCCCGCACTCTCCTTCTCCGTCTCTTAAGTGGAAATTTCGTTCAAATGC TGTTTTACAAGTTCTCAGCAACTTGGCAGCTGATTTTTTCTGCCTACAGGAAGTTGATGAGTTTGATAGCTTTTACAAAGGAAAAATGGAGGAGCTAGGA TATTCTTCTATTTATATGAAGAGAAGTGGACAGAGAAAACGTGATGGCTGTGGTTTATTTTACAAGCATGACCGTGCTGAGTTGGTCTTAGAGGATAAAA TAGAATACAATGATCTTGTAAAGTCAATTCAAGACGAGAACTCTCCAAATGATGATGAAAACAGCAATATCCAGACAGTCCGGCCTGATAAACAAAAGGA TGTTGCATCCAAAAGTGGACCTAAATCGAATACAGAAGATCGTGGAGATCCCAATGATCCTCGTGTGAGACTAAAGCGTGACTGTGTTGGACTTTTGGCT GCATTCAAACTCAAAGATCCCTCTCGTCATGTTGTTATTGTGGCCAACACACATCTTTACTGGTATAGAAGTAGCTTTATATGTTGCTTTATTTCTTTTT TCGTGTGTTGATTTTTGATGAAAAGTTGACTTAATGTGGATGACTTCTGTGGACCTGATTTTGCTTAACTTCAGTGGTTGATTTTATAAATGACTCTTGA CTTTCTGCCCAAGGGATCCTGAGCTTGCTGATGTCAAGCTTGCACAAGCGGAATATCTTCTATCTCGCTTGGCACAATTTAGAACACTGGTATCAGATAG ATATGAATGCATACCTGAAGTCATTGTAGCTGGTGACTTCAATTCTCAGCCAGGAGATATGGTTTATCAGTACCTAACATCAGGCGATCCTTCGTCGAGA GGGGTGACTGAATGCTTAGAGGAGCCTCCTATTCCCTTATGTAGTGTCTATGCTTCTACTAGAGGAGAGCCACCATTTACAAACTACACACCTGGCTTCA CTGGAACGCTCGATTATGTATTGTTTTGCCCTTCTGACCACATTAAACCAATTAGTTTTCTCAAGCTTCCAGACTCTAATGATGCTGATATTGCTGGTGG ACTACCAAACTACAGTCATCCGAGTGATCATCTTCCGATCGGCGCTGAATTTGAAATCATCAAGGAATAAATATTCTTGATTGCCAACTGGTATTTGACT TCTCAAGTTTTGATGTTCCATCCCTTTTTAGCTTCTGTAAAATGAGAGCAAGCTACCATAACTTATGTCATCAAATCAACACAGGACATGGCAAAAAGGT GAAACAGTTACCGAAAAGCAGACATTTATCAAGTAGGTTTTGTTTTATGATGAAAAGTTCATACGTTTGACTTCTTGTCCCCTTGAAAAGTTGCAGACAA TGTACTCTGTTATACATTATTTTTAGAGAAATTTTTTTAGAGCAAGTAAATGTTTATTTATTTCGAAGGAAAATCTGGGGAAAAATCTATGCCAAATTTC TGTAGTTGTCAATTTTACTTGTCAGAAAAGATCTGCTTTTCTTGGCCATTATCATCCACTGGCTTTTCTTGGTCGCAAGCTCTAAAGCTGTGTAGGTGGG CCAGAGATTTGATGATAATCATAACAGTGATCTTTTTGGATGGCCCTTGGGTAACTATCAATTGTTTAATAAAAACCAATTAATTCAAGGAGCCAATCAA TGTTCATTGCTAGTACATTTTGTCATAGTATACATATTATTATCCCTCACCTGCTCTTACCAGAATGCACTGCATGATGGGTGATTATAAAGTATGTAAA AGGGTATGGGGAAAGTGATGTAAGGATATCATTGCTCATTTTCCTATACGCTAACAAATTCTAAGTATTCCTCCG
• Tissue: pods
• Gene name: LI_gene_163692;
• Additional information: details;

Expression of Ll_transcript_421476

FPKM

• PAB: 0.8
• PNAB: 0.4
• PS1: 0.5
• PS2: 0.2
• PS3: 0.9
• PW1: 0.5
• PW2: 0.6
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_421476

• Blastp: Carbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 48.38% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 4 from Arabidopsis with 52.67% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT1G31500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423636.1)
• Pfam: Endonuclease/Exonuclease/phosphatase family (PF03372.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;