Ll_transcript_419484

• Id Trinity: TRINITY_DN48752_c2_g1_i1
• Name Transcript: Ll_transcript_419484
• Sequence: TTTGTATATACATTTCCTTGGTCAAAAAATAATATAAAAACAGAATGATTCATTTCATTATTATGTAACTCTTGATCTCCAACTATTTTTAAGGTAGTAC TCAAGTTTCTCTTCCATCCATCTTCTACTTTGGTTAAAGATATATAGTTCTCATTGTGCTTCAAAAGCAAGTGTTTCTTCATAGTCAAATTAACAAAGTT TGAAGAAATGAATGAGAAAACAATGGACAAAACCCCCTTACTCCAAACAAAAGAAGAGTCTTTTAAGAGAACCGGGAACGTGTGGAGTGCAGTGGCACAT ATAATAACTGGTGTGATAGGGGCAGGGGTTCTGTCTCTGGCATGGTCTGTGGCACAACTTGGTTGGGTTGCTGGCATATTGCTCATACTACTCTTTGCAA CCACTACCTTTGTTTCATCAAATATTCTCTCTGACTGCTATAGATTCCAACATCCTCAATATGGCAACATTAGAATCTCTTCCTACATGGATGCTGTCAA ATTCTACCTAGGTGAAAAAAGAGAAATGGTGTGTGGAGTGCTAGTGCATGGGGGCTTATTTGGGACTACCACTGCTTATACCATTACATCAGGTACATGC ATAAGAGCCATTCTAAAATCAAATTGTTTTCACAAGGAAGGGCATCAAGCTCCATGCAAATACGGCGATACGGTGTATATGATGATGTTTGGACTAGTTC AGGTTATCATGTCATTCATACCAGATCTACATAACATGGCATGGGTTTCAGTTGTTGCAGCCACAATGTCCTTAACATACTCCTTTATTGGACTAGGACT AGGCCTAGCAACAGTAATAGAAAATGGAAGAATTATGGGGAGTGTAACAGGAGTACCGGCTGCAAATATAGCTGACAAATTATGGTTAGTCTTCCAAGCG CTTGGTGATATTGCCTTCGCCTATCCTTACTCGGTCATCCTCCTCGAAATACAGGACACTTTAAAGTCACCTCCACCTGAAAACAAGACCATGAAAAAGG CCTCCATGATTGCTATCTTCGTTACAACATTCTTCTACCTCTGCTGTGGATGCTTTGGATATGCTGCTTTTGGAAATCAAACACCAGGAAACCTTTTGAC AGGGTTTGGGTTTTACGAACCGTACTGGCTCATTGACTTTGCTAATGCTTGCATTGTTCTTCATTTGGTGGGAGGATATCAGATTTTCAGCCAACCAATA TATAGTGCTGCTGACAGATGGTGTTCAAGAAAATACCCTAACACTGGCTTTGTGAATAATCACTACAAGTTGAAACTGCCTTTGTTGCCAGCTTTTCCTC TAAATCCTTTCAGGATATGTTTTCGAACAGCCTATGTAATTTCGACGACCGGACTTGCAATCCTGTTTCCATACTTCAATCAAGTTCTAGGAGTGTTAGG AGCTATAAGCTTTTGGCCATTGGCTATATATTTCCCTGTAGAGATGTACTTTGTGCAGAAGAAAATTGGAGCTTGGTCTACAAAATGGGTTGTTCTTAGG ATATTCAGTTTTGTTTGCTTTCTTGTGTCAGTCATGGGCCTTGTTGGATCCATTGAAGGAATCATAAGCCAGAAATTAAGCTGAAAGGTTTATGCAAGTC CTCTTATTGGTACTTAATTTGTTTAGTTGCTTTATCTTTCATGTAATTCAGATCACAATAGTTCTATAATTGTTGTTCAAAGTGAATAGGGTGTTGGACA TGGGATACTAGTAGCTTTGCTTAGAGATGAATTTCCTTTTTACATATACAAAATCTTAAACTTTCTATTTGGTTAATAGAAAGGTACATGGCAAACACAA TATTGTTGATATTAAATTTCTTTGTACAATGCACATGTGGCCTTTAGTAGTTGTTGTTACCTTAGCTTCCGACAATTCTAAATGACACGAAATAA
• Tissue: pods
• Gene name: LI_gene_163720;
• Additional information: details;

Expression of Ll_transcript_419484

FPKM

• PAB: 33.2
• PNAB: 3.8
• PS1: 6.6
• PS2: 3.4
• PS3: 3.3
• PW1: 3.5
• PW2: 0.4
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419484

• Blastp: Probable amino acid permease 7 from Arabidopsis with 60.22% of identity
• Blastx: Probable amino acid permease 7 from Arabidopsis with 59.96% of identity
• Eggnog: amino acid transport(COG0814)
• Kegg: Link to kegg annotations (AT5G23810)
• CantataDB: Link to cantataDB annotations (CNT0002804)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435716.1)
• Pfam: Transmembrane amino acid transporter protein (PF01490.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;