Ll_transcript_419489

• Id Trinity: TRINITY_DN48752_c2_g1_i4
• Name Transcript: Ll_transcript_419489
• Sequence: TTTGTATATACATTTCCTTGGTCAAAAAATAATATAAAAACAGAATGATTCATTTCATTATTATGTAACTCTTGATCTCCAACTATTTTTAAGGTAGTAC TCAAGTTTCTCTTCCATCCATCTTCTACTTTGGTTAAAGATATATAGTTCTCATTGTGCTTCAAAAGCAAGTGTTTCTTCATAGTCAAATTAACAAAGTT TGAAGAAATGAATGAGAAAACAATGGACAAAACCCCCTTACTCCAAACAAAAGAAGAGTCTTTTAAGAGAACCGGGAACGTGTGGAGTGCAGTGGCACAT ATAATAACTGGTGTGATAGGGGCAGGGGTTCTGTCTCTGGCATGGTCTGTGGCACAACTTGGTTGGGTTGCTGGCATATTGCTCATACTACTCTTTGCAA CCACTACCTTTGTTTCATCAAATATTCTCTCTGACTGCTATAGATTCCAACATCCTCAATATGGCAACATTAGAATCTCTTCCTACATGGATGCTGTCAA ATTCTACCTAGGTGAAAAAAGAGAAATGGTGTGTGGAGTGCTAGTGCATGGGGGCTTATTTGGGACTACCACTGCTTATACCATTACATCAGGTACATGC ATAAGAGCCATTCTAAAATCAAATTGTTTTCACAAGGAAGGGCATCAAGCTCCATGCAAATACGGCGATACGGTGTATATGATGATGTTTGGACTAGTTC AGGTTATCATGTCATTCATACCAGATCTACATAACATGGCATGGGTTTCAGTTGTTGCAGCCACAATGTCCTTAACATACTCCTTTATTGGACTAGGACT AGGCCTAGCAACAGTAATAGAAAATGGAAGAATTATGGGGAGTGTAACAGGAGTACCGGCTGCAAATATAGCTGACAAATTATGGTTAGTCTTCCAAGCG CTTGGTGATATTGCCTTCGCCTATCCTTACTCGGTCATCCTCCTCGAAATACAGGTAACCTTCAATTTCATATTCCAATATACAAGACAGAATTTAAAGC TGATGCAAAGTATCGAAACTCTTTTCGAATGAAGGACACTTTAAAGTCACCTCCACCTGAAAACAAGACCATGAAAAAGGCCTCCATGATTGCTATCTTC GTTACAACATTCTTCTACCTCTGCTGTGGATGCTTTGGATATGCTGCTTTTGGAAATCAAACACCAGGAAACCTTTTGACAGGGTTTGGGTTTTACGAAC CGTACTGGCTCATTGACTTTGCTAATGCTTGCATTGTTCTTCATTTGGTGGGAGGATATCAGATTTTCAGCCAACCAATATATAGTGCTGCTGACAGATG GTGTTCAAGAAAATACCCTAACACTGGCTTTGTGAATAATCACTACAAGTTGAAACTGCCTTTGTTGCCAGCTTTTCCTCTAAATCCTTTCAGGATATGT TTTCGAACAGCCTATGTAATTTCGACGACCGGACTTGCAATCCTGTTTCCATACTTCAATCAAGTTCTAGGAGTGTTAGGAGCTATAAGCTTTTGGCCAT TGGCTATATATTTCCCTGTAGAGATGTACTTTGTGCAGAAGAAAATTGGAGCTTGGTCTACAAAATGGGTTGTTCTTAGGATATTCAGTTTTGTTTGCTT TCTTGTGTCAGTCATGGGCCTTGTTGGATCCATTGAAGGAATCATAAGCCAGAAATTAAGCTGAAAGGTTTATGCAAGTCCTCTTATTGGTACTTAATTT GTTTAGTTGCTTTATCTTTCATGTAATTCAGATCACAATAGTTCTATAATTGTTGTTCAAAGTGAATAGGGTGTTGGACATGGGATACTAGTAGCTTTGC TTAGAGATGAATTTCCTTTTTACATATACAAAATCTTAAACTTTCTATTTGGTTAATAGAAAGGTACATGGCAAACACAATATTGTTGATATTAAATTTC TTTGTACAATGCACATGTGGCCTTTAGTAGTTGTTGTTACCTTAGCTTCCGACAATTCTAAATGACACGAAATAA
• Tissue: pods
• Gene name: LI_gene_163720;
• Additional information: details;

Expression of Ll_transcript_419489

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0
• PS2: 0.5
• PS3: 0.4
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419489

• Blastp: Amino acid permease 1 from Arabidopsis with 52.4% of identity
• Blastx: Probable amino acid permease 7 from Arabidopsis with 56.42% of identity
• Eggnog: amino acid transport(COG0814)
• Kegg: Link to kegg annotations (AT1G58360)
• CantataDB: Link to cantataDB annotations (CNT0002804)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435716.1)
• Pfam: Transmembrane amino acid transporter protein (PF01490.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;