Ll_transcript_420557

• Id Trinity: TRINITY_DN48766_c2_g1_i1
• Name Transcript: Ll_transcript_420557
• Sequence: CCACTCCTTTAAGCTCAGTGTTCAAAACAAGCTTCTGAACGTGGATGAAAACATCTATATACCTGTTACAAAAGCAGAGATAGCTGTTTTGAGCTCAATT TTTAATTTTATCATACCATATCTAATAGGTTGGCATACCTTTGCAAACTCCATAAAGCCAGATGATTCAAATGGAGTGAATAATAGTAGCAATCCAAGAT ATGGAGGAGACTATGAATGGAGCAGATAGATAGATAGATAGATAGGGATCAATCACTTTTGCTTCTAATCACTTCATGGTGTTATCAAGTGTAGAATATG TAGTGGGATCAATCACTTCAAGAGACAGTCAACATTTAGCACATCATGTTTCTTCTAATTGTCAATGGAGATGAAGTGTTGTATTTATAGTACACAAATA TAAAGTTGTGTCCATTGAACCTAGTCAGGATGTTAGTAAGGAGAGTGAAGATAGTCCCTTCTTGCATTTGCTGCTCTTAATTAATCATCAAAACTTCACA CAAGTGCAGTCATTTTCATGCATATTCATATATAGTCTGCTTTGTTAATATGCATAATAGTATATTGTGTATTTAGGAGTGTTGCCGTAAATAAAAAATG TAGTAGTAACTATTTCTAAAACCAAAAACTCAATGGTATGGATATATAAAATACACTAAATATAATCCTACACAATTTAGTAATTGTCCTTACTTTTGTT TATAGGAGTTATTTTCATCTCAAAAAAATGTCACTAAGACTATTCATGAAATAGATGTTTTTGCAGTAATATTTTGTCCTTTAATTATACTTGCCTCCAA GTTTGTAGTATATGATAAATGTTACTGTCTTGGGTAATTTGGAAAACCATGAAGTATTCTAATGTTCTAATAAAGTAATAGTTAGAAGGTGTTATTCAAT AATGTTATTAGTTCATAGTTTGGTTTGTGAATCTGATGATACTTTTTTTATTAGTCACTATTTTAAGCATGTCATTAACACTTGATCTGTACTTCTTATA AGATAAATAAATATTTGAAGAAGTAGATGAACCTGGACATAACATTGGTCCATAGTGAGAATTGAAGAATATTGTGAAGTTGCAGGACATCTGATCATAT CGATTGCCCACATGCCTCTCTGCATGTTTCCCAAAGTCTTCAGTTTCAACTTTAAAGTTATTTATCCTTTTCTGCTTTTCTGATACATACTCACAACTCA CAACTCACACCTCATATATATGGAATCTAGCTAGTACCTCATTCTATGTACACACAATGTTGTGTACATAGAATGCTACACTGCTTTACTTATTTTATTT TTATACTTGTTTTACCTATAATTGCTGCACATGATTTATTAGTTTTTTGTTTTGAATTATAAAATTCATGGCTATGAAAATGACTAAAAGGGTTTGAGAA GTGATGATTTGAATCACTTTAAGAGCAAGAAATGCAATAAGGGACTTTCTTCACTCTCCTTATCAAACATCCGGACCAGGTTCAGGAGACAGAAACTAAG GTTTCTCTGACATATATGACTGTACTATATATAAATAGAACAGTTGATGTGCATTTGTTGAGCATGACAACTCAGGAGTTAATTGTTGGCTGTCTCTTGA AGTTCCTATGAGCACTTCACACATGTGTATCACTACTCTAATTAGAAAGAGTTAAGAGTGGTGTGAAGTGTTTGGAGGAACTTCAAGATTCATCTAACAC TGATTACCAAGATTCAACTAACAAATGCAATAAGGGTTCAACTCTATGGTTCTGCATTGTCATTTTACATTTCACACTCGATTTATTACTTTTGTTCGTT ACAATATAGTATAAGATTGATGTAAATAATATATCCTTAAAATTATTAATGTATTTTGTAATTAACTAAAAATAATAAAAAAATGTTGAGTTGTATACAG AATTTGATTAGTGTTAATGTAATTTAGTGTTACTGAAATAATAATAGTATGATGAGGTATTTGATGGTAGAGGGTAAGGCCCTAAGCGAGCCCATGGGCT TAGATTAAGCAGCAAATGAGGGTGATGTGTATGTAGGTTAACATCCTTCATTCAGAGAGAGACTCAGAGAGAGAGAGACACACAGAGAGAGACACACAGA GAGAGACACAGAGAGAGACACAGACACAGAGAGAGAGAGAGAGAGAGAATGTTTGGGCGACGCAAGTTTCTTTCCTTTCGCTTAGTCATCGG
• Tissue: pods
• Gene name: LI_gene_163832;
• Additional information: -

Expression of Ll_transcript_420557

FPKM

• PAB: 3.2
• PNAB: 6.1
• PS1: 2.6
• PS2: 2.8
• PS3: 2.4
• PW1: 4.2
• PW2: 3.6
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420557

• Blastp: -
• Blastx: Single-stranded DNA-binding protein WHY3, chloroplastic from Arabidopsis with 75.34% of identity
• Eggnog: Single-stranded DNA-binding protein that functions in both chloroplasts and nucleus. In chloroplasts, maintains plastid genome stability by preventing break-induced and short homology- dependent illegitimate recombinations. In(ENOG41124UZ)
• Kegg: Link to kegg annotations (AT2G02740)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446860.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;