| Id Trinity | TRINITY_DN48766_c3_g3_i10 |
|---|---|
| Name Transcript | Ll_transcript_420582 |
| Sequence | TAATACTTTTTTATGGATAATGTAAAAACTACTCTCTATTTTGTTTCTCACACTCTCGCTCTCATTCATTTTCCCCCTTTCAATTCAAATAAAATTCACA CTCTAACTCTGGTTAGGGTTTCAAACCTCCATTGAGTTCTCCTTCTAAATACAACAGAACCCTCAAATTCAGTCACGCCCAGCCAATGAACATGTCCATT CAGATCGGCGCCGCCGAAAATGACGACGCTTCCGGTCAGCCTTCCATCGACCACATTCAATACGAAACGCATGACCTTGAAGATGGTAACGGTGGAATTG GCAGTTGTGTAATCGAAGAACTTAATTCTGACGGTGTCTATATTTCCGGTGATGGTGGTGGTGGCGACCACGACTTTTCTCTTCAACCCTGCGATGGGTC TAGCCATCGTTCTAGCCAGCTATCGCTGGCGTTTCGTGGCCAAGTTTATGTTTTCGATTCTGTTACACCGGATAAGGTTCAATCGGTATTGTTACTTTTG GGTGGACGTGAATCACCATGCCCAGATACAGCACCTCAACATGATCAAAGGGTATTTTCTGATAATAGAAGAACAATGATACTCATATCACCTCACATCA GTTTACTATTTACTGTACAACTTCAAGATCTTTATCACCTCATATCAATTACTTACTATCAGATGTTAATATATCAATAATCCATATATTTATTAAAGTC GGGTAGTAAATACCATGATATTGGATGATTGTTTCTTAAAGTTTCATTTTGAGCAGGCCTATGGCTTCCTGGTGTAAGTTAACAAAATTTGTAAACATGT TAAGGGTCTGGTGATAAAGGCATTGGTAAATGGTAAAATGAGGGGTGTTTGAGTAGCATTTTTCATATTACAACTTTTTAATGCACAGTGCCGAGTGGCA CTTTGTAATTTTTTTAGGTCCTGCAGCAGGGTCCAATGGAATATCCTGCAAGATGTAGTCAACTGCAGCGGGCAGCCTCGTTAAGCAGGTTTCGTCAGAA GAAGAATAAGCGATGCTTTGATAAGATAGTTAGATATGATGTACGTCAAGAAGTTGCACTCAGGATGCACCGTAACAAGGGTCAATTTATTTCATCTAAG AAACAAGATGGAGCTAATAGTAGGGGTACAGACCAGGAGTCAGGGCAGGATGATAGTCCATCCGAAACTGCATGCACACACTGTGGCATTAGTTCAAAAT CTACCCCAATGATGCGGCGAGGGCCAAATGGTCCAAGATCACTATGCAACGCTTGTGGACTTTTTTGGGCAAGTAGGGTATGTATTTTCTCCACATGGTT TGTATTTGGAATTTATATATTTTTAATATGTACGTTCATATACCTAAAGCAGCTCAAATTGAAATGAAATTTACTCTTATTTCACAGCCACATAATTTTC TAAGTCTCCTGTGTAGCATTTTCATTTTAATAAAGCGTACAACATGAACATGTGGCTTATCTTCCTGCTCTGTATGCTATTTTGCTGTATGCATGTTAAG TTGCACATTTCTTCCAGCTTTTTCTGTTTTTTGTTTCTTATGCATGCACTGCTCTGTTCCTTTGCTGTATTGCAATTTTAAATGATACTGTTAAATGAAT TTTAGCTTACAGTTGGTTTGAAAATATTTAAGTGATAGTCGTTTTGACTTTCATGTCCAAAATGCTGGTTCTTGATTCTGTTTCCACTTCCTGCTACATC GTGGACTTAATTGCATGGAAACATAATATTAAGTTACCCAGGAAAGTGAGAGAATCTAACATTGTATGTGGTTTATTCTAGCACTAATTGAGAATGTCAA AATCTTACGGAGTCTTGATATTGCATATGCACTTGTTAGTGAAGTATCTTCTTAGTGTCATTAAGGGGTAATTTAACTTTCCTTTCTTCTCAACTTCACA TTAATCTTTTGCCTATAGGGAGGTGCAACTATTTTCTCTGTGAGCATTTAGTCAAATTTGCTCAACTAGGAATCTCCAATTTGGTATCCACTGTAACTGC TTTGTGGTCAGTAGTCCCACTTTTTGACATTTGTATTGTGCAGGGTGCTCTGAGAGACCTTTCTAAGAGAAACCAGGAACTCTCTCTTATACCAACGGAA CAGGTAAGCTTTCTTCCACTACATGATCAAATCGTCTATTAATCGGCTATTAACCGTCATTGACTGTATTATGTGCATCCTTTTTACCTTTATACTCTTG TTTTGCACCTCATGATCAGCAGGTTGGTAAAAGTAAGTACTCAAACTGTGGGACTGCCATCCGTGCACATAACAATCTTGTTGCTTTCTCTGTCAAAGAT AACCCGGATTTGGTATCAGATTGTTGAGTTATCCAGTCAAAATGCCATAGTGGTTGCATGTGGCATAAGTAGAGGCTTCCATTCATATTGACCAATAGAA TGAATGTATAGTTATAACAATGGTCTCATCAATACAAGAGTTTTATCTTTATATGTATGGATCAGTGGCATTAACTGTTGATCTCTGAATGTATAACCTG GAATTGGGACATTTGACAAGAGAAACAAAACGATTCTTGCAAAGCCATAAATCAACAGATACATTTATAGAAGGTGAAGAGACCTTTAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_163835; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420582
| Blastp | GATA transcription factor 28 from Arabidopsis with 41.9% of identity |
|---|---|
| Blastx | GATA transcription factor 25 from Arabidopsis with 72.81% of identity |
| Eggnog | Transcription factor(COG5641) |
| Kegg | Link to kegg annotations (AT1G51600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014522426.1) |
| Pfam | tify domain (PF06200.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |