Id Trinity | TRINITY_DN48766_c3_g3_i13 |
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Name Transcript | Ll_transcript_420601 |
Sequence | TAATACTTTTTTATGGATAATGTAAAAACTACTCTCTATTTTGTTTCTCACACTCTCGCTCTCATTCATTTTCCCCCTTTCAATTCAAATAAAATTCACA CTCTAACTCTGGTTAGGGTTTCAAACCTCCATTGAGTTCTCCTTCTAAATACAACAGAACCCTCAAATTCAGTCACGCCCAGCCAATGAACATGTCCATT CAGATCGGCGCCGCCGAAAATGACGACGCTTCCGGTCAGCCTTCCATCGACCACATTCAATACGAAACGCATGACCTTGAAGATGGTAACGGTGGAATTG GCAGTTGTGTAATCGAAGAACTTAATTCTGACGGTGTCTATATTTCCGGTGATGGTGGTGGTGGCGACCACGACTTTTCTCTTCAACCCTGCGATGGGTC TAGCCATCGTTCTAGCCAGCTATCGCTGGCGTTTCGTGGCCAAGTTTATGTTTTCGATTCTGTTACACCGGATAAGGTTCAATCGGTATTGTTACTTTTG GGTGGACGTGAATCACCATGCCCAGATACAGCACCTCAACATGATCAAAGGGTATTTTCTGATAATAGAAGAACAATGATACTCATATCACCTCACATCA GTTTACTATTTACTGTACAACTTCAAGATCTTTATCACCTCATATCAATTACTTACTATCAGATGTTAATATATCAATAATCCATATATTTATTAAAGTC GGGTAGTAAATACCATGATATTGGATGATTGTTTCTTAAAGTTTCATTTTGAGCAGGCCTATGGCTTCCTGGTGTAAGTTAACAAAATTTGTAAACATGT TAAGGGTCTGGTGATAAAGGCATTGGTAAATGGTAAAATGAGGGGTGTTTGAGTAGCATTTTTCATATTACAACTTTTTAATGCACAGTGCCGAGTGGCA CTTTGTAATTTTTTTAGGTCCTGCAGCAGGGTCCAATGGAATATCCTGCAAGATGTAGTCAACTGCAGCGGGCAGCCTCGTTAAGCAGGTTTCGTCAGAA GAAGAATAAGCGATGCTTTGATAAGATAGTTAGATATGATGTACGTCAAGAAGTTGCACTCAGGATGCACCGTAACAAGGGTCAATTTATTTCATCTAAG AAACAAGATGGAGCTAATAGTAGGGGTACAGACCAGGAGTCAGGGCAGGATGATAGTCCATCCGAAACTGCATGCACACACTGTGGCATTAGTTCAAAAT CTACCCCAATGATGCGGCGAGGGCCAAATGGTCCAAGATCACTATGCAACGCTTGTGGACTTTTTTGGGCAAGTAGGGTATGTATTTTCTCCACATGGTT TGTATTTGGAATTTATATATTTTTAATATGTACGTTCATATACCTAAAGCAGCTCAAATTGAAATGAAATTTACTCTTATTTCACAGCCACATAATTTTC TAAGTCTCCTGTGTAGCATTTTCATTTTAATAAAGCGTACAACATGAACATGTGGCTTATCTTCCTGCTCTGTATGCTATTTTGCTGTATGCATGTTAAG TTGCACATTTCTTCCAGCTTTTTCTGTTTTTTGTTTCTTATGCATGCACTGCTCTGTTCCTTTGCTGTATTGCAATTTTAAATGATACTGTTAAATGAAT TTTAGCTTACAGTTGGTTTGAAAATATTTAAGTGATAGTCGTTTTGACTTTCATGTCCAAAATGCTGGTTCTTGATTCTGTTTCCACTTCCTGCTACATC GTGGACTTAATTGCATGGAAACATAATATTAAGTTACCCAGGAAAGTGAGAGAATCTAACATTGTATGTGGTTTATTCTAGCACTAATTGAGAATGTCAA AATCTTACGGAGTCTTGATATTGCATATGCACTTGTTAGTGAAGTATCTTCTTAGTGTCATTAAGGGGTAATTTAACTTTCCTTTCTTCTCAACTTCACA TTAATCTTTTGCCTATAGGGAGGTGCAACTATTTTCTCTGTGAGCATTTAGTCAAATTTGCTCAACTAGGAATCTCCAATTTGGTATCCACTGTAACTGC CATCCGTGCACATAACAATCTTGTTGCTTTCTCTGTCAAAGATAACCCGGATTTGGTATCAGATTGTTGAGTTATCCAGTCAAAATGCCATAGTGGTTGC ATGTGGCATAAGTAGAGGCTTCCATTCATATTGACCAATAGAATGAATGTATAGTTATAACAATGGTCTCATCAATACAAGAGTTTTATCTTTATATGTA TGGATCAGTGGCATTAACTGTTGATCTCTGAATGTATAACCTGGAATTGGGACATTTGACAAGAGAAACAAAACGATTCTTGCAAAGCCATAAATCAACA GATACATTTATAGAAGGTGAAGAGACCTTTAAC BLAST |
Tissue | pods |
Gene name | LI_gene_163835; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420601
Blastp | GATA transcription factor 28 from Arabidopsis with 41.9% of identity |
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Blastx | GATA transcription factor 25 from Arabidopsis with 72.81% of identity |
Eggnog | Transcription factor(COG5641) |
Kegg | Link to kegg annotations (AT1G51600) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_014522426.1) |
Pfam | tify domain (PF06200.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |