| Id Trinity | TRINITY_DN48766_c3_g4_i4 |
|---|---|
| Name Transcript | Ll_transcript_420587 |
| Sequence | CTCTCTCTCTCTCTCTCTCTTCTCACAGAACCCTAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCTCAACATGGCTGGCAAGAACCG CAACAATAATCGCAATGATCCATTCTTCACTCATGATTCCCGCAAAAAACGCAAACCCAACAAGGAACAACCCCTTCAAGACGATGCCGAAATTGAAAGC GATTTCGAAGATGAACAAGACGATGCCTTTTTCACCCGAGACGGTGAAGACAACTCTGACAATGAATCCCTCGACAAGGAGGATGAAGAAACTGAAGCTG AAGCTAGGAAGAGAATCGCTAATGATTATTTGAAAATGGTTCGCGATATCTCGCAGAAAGAGAAGGAACAAATGGATGATGATGATGATGATGAGAGTGA TGATGATGGTGCACGTGATTCTCTTGTTGCTCAGAAACTGATTAAGGAGCAACAAGAAGAAAGTGGTCGTGTTAGAAGGAGCATTGCTTCTAGGGTTCAA GTGGCGGAGACTAGTGGAGGTGGATTTAGAGTGTTGGTGAAGCACAGGCATTCGGTTACTGCAGTGGCACTGTCGGAGGATGATTCTAGGGGCTTTTCGG CTTCCAAGGATGGAACCATTATGCATTGGGATGTGAATAGCGGAAAGTGCGAGAAGTATAAATGGCCTAGTGATTCAGTGCTAAAGTCTCATGGTGTGAA GGAGCCTCAGGGTAAAGCTACCAAGCAAAGTAAGCATGTATTGGCATTGGCTGTGACTTCAGATGGTCGGTATTTGGCGACTGGTGGTCTCGACCGCCAT GTTCATTTATGGGATACCCGTACCCGAGAGCATATTCAGGCGTTTCCAGGTCATAGAGGCCCTGTTTCTTGTTTGACTTTTAGGGAGGGGACTTCAGAGC TTTTTTCGGGTTCATATGATCGGACAGTTAAGATTTGGAATGCTGAAGACAGAACATACATGAATACCCTATTTGGCCACCAGAGTGAAGTAGTGGGTAT TGATTGCTTACGCAAAGAAAGGGTACTAACTGTTGGACGTGATCGTAGCATGCAGTTGTTTAAGGTTCATGAAGAGTCACGTCTTGTATTTCGTGCTCCT GGGTCTTCCCTAGAATCCTGTTGTTTTGTTAATAATGAGGAACTCTTATCTGGTTCGGATGATGGGAGCATTGAGCTTTGGACCTTACTGCGAAAAAAAC CTGTTTACATTTTGAGGAATGCTCATGCTTTACTGACAGATGGCATTAAATCTGACCAAAATCATAGTGGTGGAATCCCCAACGGTGACTTAGAGAATGG TCACCACCATCCGGAGAACCATAACTGTTCATCAGTATTTTCATGGGTCAGCGCAGTTAATGTTTGTAGAAACAGTGACCTTGCTGCATCTGGGGCCGGT AATGGTTCTGTCCGATTATGGGCAGTTGAAAGTGAGTCCAAAGACATTAAACCTCTTCATGATGTGCCATTGGTTGGTTTTGTGAATTCCTTGGCTTTTG CAAAATCAGCACAATTCTTAGTTGCTGGAGTTGGACAGGAACCTCGTTTAGGAAGGTGGGGGCGTACCGCCGAAGCTCGGAATGGAGTTGCAATTCTTCC TCTAAAGTTATCATGAATGAAGGAGTATACATCCTCAATTCTGACATACAAAATGCAACATATGACTTGAAACATGTCTGTCCTGAGATCCTAATTTATA TGTATTTTGTTTACATCCCTTTCTTAAGAGCTAAAAAATTTTGTTAAGGGCATTTTTGTATGAGATTGATTTTTTCAAATGTGATATTTACATTTTATAA TGACCCAATCGTTTTGGGCAAGTCTGAAACTATTCAATTGATTTTAGAGCCCCATAACCACCAATGAGAATAATTGAGGTCGGCCTTGGGAACCTTTATT TTACTCTGGACAACTTTATTTGTGTAATATTCATTGTCTCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_163836; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420587
| Blastp | U3 snoRNP-associated protein-like YAO from Arabidopsis with 55.19% of identity |
|---|---|
| Blastx | U3 snoRNP-associated protein-like YAO from Arabidopsis with 55.78% of identity |
| Eggnog | ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)(ENOG410XP9U) |
| Kegg | Link to kegg annotations (AT4G05410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420015.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |